| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5163 |
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| Symbol | |
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| ID | 6179638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2349801 |
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| End bp | 2351582 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684914 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001811824 |
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| Protein GI | 172064173 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.111415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA GCGTCCGCAG CTATCTTTCC CCCACCCTGG TCCTGCTGGC CTTCGACTGG
CCCGACGCGG CGTCGCGCGC CGATTTCCTC GGCTTCGCGA TCCGGCGCAC GCCGGGCTTC
TGGTCGGCCG ACGGCAAGAC GCGGGCGCCG AACAGCTGGC TGCCGAACCG GCTGACGTTC
GACGGACCGG CCGCCGACAC GCAGGGCGAC GCGCCGACCG ACCAGGCGCC GATCCAGAAA
TTCATGTGGT GGGATGCGCG CATCGATCCG CCGGATCGCG ATGCGTCGTT CCGCTATGAC
GTGTTTCCCG TCGTCGGCAC GCCGGCGAAC CTGCAGGTGC TCGATGCGGA AGCCGGCGTG
TGCGATGTCG TGCTGCCCGC GCATAGCGTC GACGGGATCG GCACCTGGTT CAACCGCGCC
GTGGTGAGCT CGCAGGCGTT CGCGAAGCAG GTCGCGGCGC TGGGTCTCGC GCCGGGCGCC
GCGCCGAGTG ATACGCAGGC GCTGAAGTTG CGCACGTGGC TCGCGAACGA CATGGAGCAG
GTGTTCGCGG AGATGCTCGA TCCCGCGTCG CGCGCGGTGT CGGCCGTCTA TCACCTGACG
GACCCGCTGT GGGCGCTGCC CGCGTTCGAG GCGTTCGGAC GCCGGCACGG CGAAGCGTCG
CTCGCGATCG TCTACGACGC ACACACGACC GCGCGCAAGG GCAAGCCGGC GCTGCCGTCG
CCGAACCAGC CGGCCGTCGA CGCGCTGCAG GGCCTCGCGA CGCTGGCGCC GCGCGACCGC
ACGCACATCA TGCACGACAA GTTCATCGTG ACCGACGCGC CGGGGAATGC GACGCCCGCG
CGCGTGCTGA CCGGCTCCGC GAACTTCACG ACCGAAGGGC TGACGGAACA GGCCAACGTG
CTGCACGCGT TCGATTCGCC GGCGCTCGCC GCGCTGTACA ACGAGCGCGC GCATGCGCTG
GCCGCGAATC CGTCGATCGC GGAGACGGCG CGGCTGTCGT CGGGCTGGTC CGCGCCGTTG
ACGGTGGGTA GCGCGCAGGT GCGCGTCGCG TTTTCGCCGG AGCCGGCGGG GCAGCGCACC
CAGATCGATA CGATCGTCGC CGCGATCGCG GCCGCGAAGC ATTCGGTGTC GTTCTGCCTG
TTCATGCCGA CCGACGCGGC GCTGCGCGAC GCATGCTTCG CAGCCGGCGA CCGCGGCCTG
ATGATGTTCG GCCTGGTGAA CCGCATCAGC GCCGCCAGCG CGACGAAGGC CGATGCCGCG
CAGCACGACG GCCAGTCGCT CGATGCGGCG ACGCTCGCGA ACCTCGAGCT TTACCATCGC
CAGCGCGATC GTCGCGACGT GATCGATGCC GCGTATTTCT CGCCGGCGAC GGTGCCGCAC
GGTTTCGAGC CGGAGCTGCG CCTCTTTCCG GGCGAGCCGG CGCCGGCCTA TCCGCCGGTC
GTGATCCACC ACAAGTTCAT CGTGATCGAT GCGGAAGGCG CGAACCCGAT CGTCTATACG
GGCTCGGCAA ACATGAGCCG CAATTCCGAG CAGTACAACG ACGAGAACCT GCTCGAGATT
CGCGACACGC GGATCGCCGC GATCTATCTC GCGGAATTCC TGCGGCTCTA CGAGCACTAT
CGCGCGCGGG CACTGGCGAT CGAGACGAAA CGGCACGGCG CCGGTTCGCA TCGGCAGCTC
GCGCTCGCAC CGGATTCGAG CTGGGTGAAG AAGTATTACG TGGCGGGGAG CCCGGAAGAG
AAGGCGCGGA TCGCGCTGGC GTCGACCGCG CCGACGGACT GA
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| Protein sequence | MTVSVRSYLS PTLVLLAFDW PDAASRADFL GFAIRRTPGF WSADGKTRAP NSWLPNRLTF
DGPAADTQGD APTDQAPIQK FMWWDARIDP PDRDASFRYD VFPVVGTPAN LQVLDAEAGV
CDVVLPAHSV DGIGTWFNRA VVSSQAFAKQ VAALGLAPGA APSDTQALKL RTWLANDMEQ
VFAEMLDPAS RAVSAVYHLT DPLWALPAFE AFGRRHGEAS LAIVYDAHTT ARKGKPALPS
PNQPAVDALQ GLATLAPRDR THIMHDKFIV TDAPGNATPA RVLTGSANFT TEGLTEQANV
LHAFDSPALA ALYNERAHAL AANPSIAETA RLSSGWSAPL TVGSAQVRVA FSPEPAGQRT
QIDTIVAAIA AAKHSVSFCL FMPTDAALRD ACFAAGDRGL MMFGLVNRIS AASATKADAA
QHDGQSLDAA TLANLELYHR QRDRRDVIDA AYFSPATVPH GFEPELRLFP GEPAPAYPPV
VIHHKFIVID AEGANPIVYT GSANMSRNSE QYNDENLLEI RDTRIAAIYL AEFLRLYEHY
RARALAIETK RHGAGSHRQL ALAPDSSWVK KYYVAGSPEE KARIALASTA PTD
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