Gene BamMC406_5153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5153 
Symbol 
ID6181301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2329593 
End bp2331020 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content67% 
IMG OID641684904 
Productmajor facilitator transporter 
Protein accessionYP_001811814 
Protein GI172064163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.507557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA CCGTGCCTGA TCCCGCTTCC GTAGCGCACA GCTTTCGAAC CGCCCCCATC 
GACGCCGGCT CGATTTCAGC CCGCCTCGAC CGCCTGCCGC CGACCCGCAG CGTCTGGAAG
CTCGTCGTGC TGCTGAGCCT CGGCTTCTTC TTCGAACTCT ACGACCTGCT GTACAGCGGC
TACATCGCGC CGGGCCTCGT GAAAAGCGGG ATCCTGTCGG CGACGACGCA CGGCCTGTTC
GGCACCACGG GTGTCGCGAG CTTCATCGCC GCGTTGTTCT CCGGTCTCTT CATCGGCACG
ATCGCGTGCG GCTTCCTCGC GGACCGCTTC GGCCGCCGGG CGATCTTCAC GTGGTCGCTG
CTGTGGTACA CGGCCGCCAA CGTCGTGATG GCGTTCCAGG ACACCGCGGC CGGATTGAAC
TTCTGGCGCT TCGTCGTCGG CCTCGGCCTC GGCGTCGAGA TGGTCACGAT CGGCACGTAT
ATCTCCGAAC TCGTGCCGAA GCAGATCCGC GGCCGCGCAT TCGCGTGCGA ACAGGCAGTC
GGGTTCGTCG CGGTACCGGT GGTCGCGTTC CTCGCGTACC TGCTCGTGCC GCACGCGCCG
TTCGGTCTCG ACGGCTGGCG CTGGGTGGTG CTGATTGGCG CGCATGGCGC ACTGTTCGTG
TGGTGGATTC GCCGCGCGTT GCCGGAAAGC CCGCGCTGGC TCGCGCAGCA GGGCCGCATC
GACGAAGCCG ACCGCATCAT GCGCGCGCTC GAGGCGAAGG TCGAAGCCGA ATACGGCCGG
CCGCTGCCGC CGCCCGCGCC GGCCGAGCCG GTGCCGCCGC GCGGCAGCTT CCGCGACATG
TGGGTGCCGC CGTATCGCAG CCGCACGATC ATGATGACGA TCTTCAACGT GTTCCAGACG
GTCGGTTTCT ATGGCTTCGC GAACTGGGTG CCGACGCTGC TGATCAAGCA GGGCATCACG
ATCACGTCGA GCCTCATGTA TTCGAGCGTG ATCGCGCTCG CGGCGCCGCT CGGTCCGCTG
ATCGGCCTCG TGATCGCCGA CCGTTTCGAG CGCAAGTCGG TGATCGTCGC GATGGCGGCG
GCGATCGTCG TCTGCGGGCT GATGTTCAGC CAGACGACGG TGGGCGCGTT CCTGATCGTG
CTCGGCATCG GCCTCACGCT CGCGAGCAAC ATCATGTCGT ACAGCTTCCA CGCGTATCAG
GCCGAACTGT TCCCGACGTC GATCCGCGCA CGCGCGGTGG GCTTCGTCTA CTCGTGGAGC
CGCTTCTCGG CGATCTTCTC GTCGTTCGTG ATCGCGGCCG TGCTGAAAGG CTTCGGCACG
TTCGGCGTGT TCGCGTTCAT CGCCGGCGCG ATGGTGATCG TGATGGCCGC GATCGGGCTC
ATGGGGCCGC GCACCAAAGG CATCGCGCTC GAAGCGATTT CGAAGTAG
 
Protein sequence
MASTVPDPAS VAHSFRTAPI DAGSISARLD RLPPTRSVWK LVVLLSLGFF FELYDLLYSG 
YIAPGLVKSG ILSATTHGLF GTTGVASFIA ALFSGLFIGT IACGFLADRF GRRAIFTWSL
LWYTAANVVM AFQDTAAGLN FWRFVVGLGL GVEMVTIGTY ISELVPKQIR GRAFACEQAV
GFVAVPVVAF LAYLLVPHAP FGLDGWRWVV LIGAHGALFV WWIRRALPES PRWLAQQGRI
DEADRIMRAL EAKVEAEYGR PLPPPAPAEP VPPRGSFRDM WVPPYRSRTI MMTIFNVFQT
VGFYGFANWV PTLLIKQGIT ITSSLMYSSV IALAAPLGPL IGLVIADRFE RKSVIVAMAA
AIVVCGLMFS QTTVGAFLIV LGIGLTLASN IMSYSFHAYQ AELFPTSIRA RAVGFVYSWS
RFSAIFSSFV IAAVLKGFGT FGVFAFIAGA MVIVMAAIGL MGPRTKGIAL EAISK