Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5153 |
Symbol | |
ID | 6181301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2329593 |
End bp | 2331020 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641684904 |
Product | major facilitator transporter |
Protein accession | YP_001811814 |
Protein GI | 172064163 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.507557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA CCGTGCCTGA TCCCGCTTCC GTAGCGCACA GCTTTCGAAC CGCCCCCATC GACGCCGGCT CGATTTCAGC CCGCCTCGAC CGCCTGCCGC CGACCCGCAG CGTCTGGAAG CTCGTCGTGC TGCTGAGCCT CGGCTTCTTC TTCGAACTCT ACGACCTGCT GTACAGCGGC TACATCGCGC CGGGCCTCGT GAAAAGCGGG ATCCTGTCGG CGACGACGCA CGGCCTGTTC GGCACCACGG GTGTCGCGAG CTTCATCGCC GCGTTGTTCT CCGGTCTCTT CATCGGCACG ATCGCGTGCG GCTTCCTCGC GGACCGCTTC GGCCGCCGGG CGATCTTCAC GTGGTCGCTG CTGTGGTACA CGGCCGCCAA CGTCGTGATG GCGTTCCAGG ACACCGCGGC CGGATTGAAC TTCTGGCGCT TCGTCGTCGG CCTCGGCCTC GGCGTCGAGA TGGTCACGAT CGGCACGTAT ATCTCCGAAC TCGTGCCGAA GCAGATCCGC GGCCGCGCAT TCGCGTGCGA ACAGGCAGTC GGGTTCGTCG CGGTACCGGT GGTCGCGTTC CTCGCGTACC TGCTCGTGCC GCACGCGCCG TTCGGTCTCG ACGGCTGGCG CTGGGTGGTG CTGATTGGCG CGCATGGCGC ACTGTTCGTG TGGTGGATTC GCCGCGCGTT GCCGGAAAGC CCGCGCTGGC TCGCGCAGCA GGGCCGCATC GACGAAGCCG ACCGCATCAT GCGCGCGCTC GAGGCGAAGG TCGAAGCCGA ATACGGCCGG CCGCTGCCGC CGCCCGCGCC GGCCGAGCCG GTGCCGCCGC GCGGCAGCTT CCGCGACATG TGGGTGCCGC CGTATCGCAG CCGCACGATC ATGATGACGA TCTTCAACGT GTTCCAGACG GTCGGTTTCT ATGGCTTCGC GAACTGGGTG CCGACGCTGC TGATCAAGCA GGGCATCACG ATCACGTCGA GCCTCATGTA TTCGAGCGTG ATCGCGCTCG CGGCGCCGCT CGGTCCGCTG ATCGGCCTCG TGATCGCCGA CCGTTTCGAG CGCAAGTCGG TGATCGTCGC GATGGCGGCG GCGATCGTCG TCTGCGGGCT GATGTTCAGC CAGACGACGG TGGGCGCGTT CCTGATCGTG CTCGGCATCG GCCTCACGCT CGCGAGCAAC ATCATGTCGT ACAGCTTCCA CGCGTATCAG GCCGAACTGT TCCCGACGTC GATCCGCGCA CGCGCGGTGG GCTTCGTCTA CTCGTGGAGC CGCTTCTCGG CGATCTTCTC GTCGTTCGTG ATCGCGGCCG TGCTGAAAGG CTTCGGCACG TTCGGCGTGT TCGCGTTCAT CGCCGGCGCG ATGGTGATCG TGATGGCCGC GATCGGGCTC ATGGGGCCGC GCACCAAAGG CATCGCGCTC GAAGCGATTT CGAAGTAG
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Protein sequence | MASTVPDPAS VAHSFRTAPI DAGSISARLD RLPPTRSVWK LVVLLSLGFF FELYDLLYSG YIAPGLVKSG ILSATTHGLF GTTGVASFIA ALFSGLFIGT IACGFLADRF GRRAIFTWSL LWYTAANVVM AFQDTAAGLN FWRFVVGLGL GVEMVTIGTY ISELVPKQIR GRAFACEQAV GFVAVPVVAF LAYLLVPHAP FGLDGWRWVV LIGAHGALFV WWIRRALPES PRWLAQQGRI DEADRIMRAL EAKVEAEYGR PLPPPAPAEP VPPRGSFRDM WVPPYRSRTI MMTIFNVFQT VGFYGFANWV PTLLIKQGIT ITSSLMYSSV IALAAPLGPL IGLVIADRFE RKSVIVAMAA AIVVCGLMFS QTTVGAFLIV LGIGLTLASN IMSYSFHAYQ AELFPTSIRA RAVGFVYSWS RFSAIFSSFV IAAVLKGFGT FGVFAFIAGA MVIVMAAIGL MGPRTKGIAL EAISK
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