Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5144 |
Symbol | |
ID | 6179583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2317266 |
End bp | 2317904 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641684896 |
Product | FMN-binding negative transcriptional regulator |
Protein accession | YP_001811806 |
Protein GI | 172064155 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.081926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTCC CCGCCGATTT CGCCGAATCC CGCCCCGACG CGCTGCGCGA ACTGATCGTC CAGCATCCGT TCGGCAGCCT CGTCACGCAC GGCAAGGGCG GGCTCGACGC GAACCACATT CCGTTCGAAC TGCTGCCGGG CGACGGCGGC CTCGGCGAGC TGCATGCGCA CGTCGCGCGC GCGAATCCGG TCTGGCAGGA GGTCGTGAAC GGCGACGAGG TGCTCGTGAT CTTCCGTGCC GGCGATGCGT ACATCTCGCC GAACTGGTAC CCGAGCAAGC ACGTCGCGCA CCGGCAGGTG CCGACGTGGA ACTACGTGGT CGTGCATGCG CACGGCCGCA TCACGGTGCG CGACGACGAG AAGTTCGTGC GCGGCGTGGT CGCGCGGCTG ACCCGCACGC ACGAGGCATC GCAGCCGGCG CCGTGGAAGA TGGCCGACGC GCCGAAGGAC TATCTCGACA CGATGCTGCA GTCGATCGTC GGGCTGCAGA TCGAGATCAC GCGGCTCGTC GGCAAGCGCA AGCTCGGGCA GAACAAGGCG GTCGACGATA TCCGCGGCGC GGGTGACGCG CTGATCGCGG GCGGGCAGCT CGCGATCGGC GAGGCGATGC TGGCGGAGGC GGACGCGAAG CTCAAGTGA
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Protein sequence | MYVPADFAES RPDALRELIV QHPFGSLVTH GKGGLDANHI PFELLPGDGG LGELHAHVAR ANPVWQEVVN GDEVLVIFRA GDAYISPNWY PSKHVAHRQV PTWNYVVVHA HGRITVRDDE KFVRGVVARL TRTHEASQPA PWKMADAPKD YLDTMLQSIV GLQIEITRLV GKRKLGQNKA VDDIRGAGDA LIAGGQLAIG EAMLAEADAK LK
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