Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5133 |
Symbol | |
ID | 6180524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2304636 |
End bp | 2305367 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684885 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001811795 |
Protein GI | 172064144 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA CGGCAGTACT GGAAGAAGCG GACGTCGTCG TCACGGCGTT GCAGGGGTTC TCGCTGGACG AGAGCCGGTC ATATACGGAG CAGGTGCACG CGCTGCTGCG CCACGCGATC GTGCGCGGCG CGCTGCCGCC GCGCACGGCG CTGTCCGAAG CGGTGATTTC CACGACGATC AAGGTCAGCC GCACGCCGGT GCGCGAGGCG TTCGCGCAGC TCGCCGACGA GCGGCTCGTG CAGATCATCC GCAAGGTCGG CACGCTGGTC GCGCCGATTC CGGTGTCGAT CCTCGAGGAA GGGCGCTTCG CGCGCAGCAC GCTCGAATGC GCGAACCACG TCGAGCTCGC GCAGAAGATC ACGCCGGCGC AACTGGCGGA GCTGTCGCGG ATCATCGACG CGCAGCGTGA CGCGGTGGCC GCGGGCGATG TCGAAGCGTT CTTCGATCTC GACGAGGCGA TGCACGGCCG GATGTTCGCG TTCGCGGGCC GGCCGCACGT GTGGGAAATG CTGCAGCCGA TGAAGCGTCA GTTCGACCGC GTGCGCTGGC TGCTGCTCGA GCGCGTCGAG GATCACGCGC GCCGTGCGCT GCAGGAACAC GAACAGATCC TCGCGCACAT CGCGTCGCGC AACATGGCGC TGCTCGGCGC GTCGGTCGCG GCGCACGTCG ACCGGATCGG CTCGCACCTG CCGGACGTGC GCAGCCGTGC GCCGCATTAC TTTGTCGACT GA
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Protein sequence | MSETAVLEEA DVVVTALQGF SLDESRSYTE QVHALLRHAI VRGALPPRTA LSEAVISTTI KVSRTPVREA FAQLADERLV QIIRKVGTLV APIPVSILEE GRFARSTLEC ANHVELAQKI TPAQLAELSR IIDAQRDAVA AGDVEAFFDL DEAMHGRMFA FAGRPHVWEM LQPMKRQFDR VRWLLLERVE DHARRALQEH EQILAHIASR NMALLGASVA AHVDRIGSHL PDVRSRAPHY FVD
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