| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5130 |
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| Symbol | |
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| ID | 6179818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2300073 |
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| End bp | 2302250 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684882 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001811792 |
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| Protein GI | 172064141 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.944622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCC GTCGAACGCC CCGCCGCGCG CGGACCTTGC GCCCGTGGCG CGCGAGCCTG
CCTGCCCTGA TCACCCTTTG CGTCGCCAGC GGCGCGCATG CCGATGCGGA GCCCGCCCAG
GCGGCATCCG CGCCCGCACC GGCATCCGTA TCGCCGCCCG AACGCGAACT GCCGACGATC
AGCGTCAACG CATCGGCGGC CGCCGACCCG ACCGTCGGCT ATCAGCCGCG CACCAGCAGC
ATCGCCGGCG GCGACGAGCG CCCGCTCAAG GAGATCCCGC AGTCGGTCGC CGTGGTCAGC
AGCAGCGTGA TGCAGGATCA GCAGGCGCGC TCGCTCGACG ACGTGCTCGG CAACATCAGC
GGCGTCACGC AGACCAACAC GCTCGGCGGT ACGCGCGACG CATTCATCAA GCGCGGTTTC
GGTTCGAACA ACGACGGCTC CGTGCTGGTC GACGGGGTCC GCACGCCGGT GCTGCACAGC
TATCTCGCGA CGATCGATCG CGTCGAAGTG CTGAAGGGCC CGGCTTCGCT GCTGTACGGG
ATGCAGGACC CGGGCGGCGT GATCAACCTC GTCACGCGCA AGCCGGAGGA CACGTTCGGC
GGCTCGATCT CCGCATCGCG CACGAGCCAC GGTGGCAGCA GCGCGCAGTT CGACCTGACG
GGCCCGCTCG GCAAGCCGGG GCAGGTCGCG GGCGGCACGC TCGCGTTCCG GCTCACCGGC
GAATACGACA CGAGCCGCTA CTGGCGCAGC TTCGGCCGCG AACGCAACGC GCTGATCGCG
CCCGCGCTGT CGTGGCACGA CGCGAACACG TCGGTCGACG TCAGCTACCA GTACGTCGAC
TACACGATGC CGTTCGATCG CGGCACCGTG CTCGTGAACG GCCACCCCGA CGATGGGCTG
CGCTATCGCC GCTACGAGGA AGCCTGGGCA CAAAGCAGCG GGATCCAGGA AACGCTGCGG
GCGCGCGTCG AGCACCGCTT CTCCGACGCG TGGCGCGTGC GCGCGACGTA CGGCTGGGGT
CGCGACCGCT ACGATCAGTA CATCGCCCGC GGCACCGCCT TCAACAGCGC GACCGGCGCA
ATGACGCGCA CGTCCGACGC GAACCTCGGG CGCAACGACT CCGACCAGAT CGCGACGCTC
GGCCTGCTCG GCAACCTGAC GCTCGCGGGG ATGAATCACG CGCTCTACAT CGGTGGCGAA
TACGAACGGC AGCGCAGCTT CCGCGGCGAC ACGATCCGCG GCAAGGCGAT CAAGGGCTTC
GATCTCTACG ATCCCGTCTA CGGCCTGCTC GCGCCGGGCG GCACGCCGAA CGCGAAGTCG
AGCGATTCGC TGTCAAAGGT CCACACGTAT TCGATGATCG TGCAGGACTC CGTGAAGATC
ACCGATCGGC TCACCGCGGT CGGCGGGCTG CGCTGGGAGG ACTGGCAGCA GGAATCGGGG
ATGGGGCGGC CGTTCGCGTT CGCCGACCGC TCGCACGGCA ACGTGTGGCT GCCGCAGTTC
GGGCTCGCGT ATGCGCTCAC GCCGTCGCTG ACCGCGTATG CGAACGTGAG CCGCTCGTTC
AAGCCGAACG TCGCGTCGAA CGTCACGTCA CCGCTCGCGC CGGAATTCGG CCGCGTGCTG
GAAGCCGGCC TGAAGTTCGA CCTGAAGCCG GGCATCACCG GCACGCTCGC GGCCTACCAG
ATCGACAAGC GCAACGTCGC GGTAACAGTG GACGACATCA CGTCGACGAT CGGCACCGCG
CGCTCGCGCG GGATCGAACT CGACGTCGCG GGGCAGATCA CGCGGCACCT GAGCCTGATC
GGCAGCTATG CGTATACGAA CGCGAACGAT CGCGACAGCA ACACGTCGCT CGTCAACGTC
GCACGCCATA CCGGCAGCCT GTTCGCCGTG TATGACACGG CGCTCGCGAA CCTGCCCGGC
CGCTGGCGCT TCGGCGGCGG CGCGCGGCTC GTCGGCGCAC GGCCCGGCGA CACCGCGAAC
AGCTTCACGC TGCCCGGCTA CGTGACCGTC GATGCGTTCG CGGCGTACGA GACGACGATC
GGCAAGTTCC CGACGCGCAT CCAGCTCAAC GTGAAGAACC TGCTCGACAA GACCTACTAT
CCGTCGAGCA ACAGCAACCT GATCGTCGCG GTCGGCGAGC CGCGGCTCGT CACGCTGACG
ACGACGGTGT CGTTCTGA
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| Protein sequence | MPSRRTPRRA RTLRPWRASL PALITLCVAS GAHADAEPAQ AASAPAPASV SPPERELPTI
SVNASAAADP TVGYQPRTSS IAGGDERPLK EIPQSVAVVS SSVMQDQQAR SLDDVLGNIS
GVTQTNTLGG TRDAFIKRGF GSNNDGSVLV DGVRTPVLHS YLATIDRVEV LKGPASLLYG
MQDPGGVINL VTRKPEDTFG GSISASRTSH GGSSAQFDLT GPLGKPGQVA GGTLAFRLTG
EYDTSRYWRS FGRERNALIA PALSWHDANT SVDVSYQYVD YTMPFDRGTV LVNGHPDDGL
RYRRYEEAWA QSSGIQETLR ARVEHRFSDA WRVRATYGWG RDRYDQYIAR GTAFNSATGA
MTRTSDANLG RNDSDQIATL GLLGNLTLAG MNHALYIGGE YERQRSFRGD TIRGKAIKGF
DLYDPVYGLL APGGTPNAKS SDSLSKVHTY SMIVQDSVKI TDRLTAVGGL RWEDWQQESG
MGRPFAFADR SHGNVWLPQF GLAYALTPSL TAYANVSRSF KPNVASNVTS PLAPEFGRVL
EAGLKFDLKP GITGTLAAYQ IDKRNVAVTV DDITSTIGTA RSRGIELDVA GQITRHLSLI
GSYAYTNAND RDSNTSLVNV ARHTGSLFAV YDTALANLPG RWRFGGGARL VGARPGDTAN
SFTLPGYVTV DAFAAYETTI GKFPTRIQLN VKNLLDKTYY PSSNSNLIVA VGEPRLVTLT
TTVSF
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