| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5127 |
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| Symbol | |
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| ID | 6180406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2296637 |
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| End bp | 2297980 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684879 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001811789 |
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| Protein GI | 172064138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCAA ATATCCGCAA TACGATCGAC GAATCCCCGA TGAGCGCGTT CCAGACGATG
GCGGTCACGG CCTGCGTCGT GCTGAACATG CTCGATGGTT TCGACGTGCT GGCCATCGCG
TTTGCCGCGC CGCATCTGGC CGCCGAATGG AAACTGAGCG GCAAGGAAAT CGGCCTGCTG
TTGAGCGCCG GGCTGGCCGG CATGGGCATC GGCTCGGTGC TGATCGCGCC GTTGGCCGAC
CGCGTCGGCC GCCGCCGCAT CATCCTGCTG TGCCTCGCCG TGATCTCGAC CGGGATGCTG
GCCTGCGCGG CTACCCACAG CACGCTGCAA CTCGCGGCCG CGCGTGCGTA CACGGGCCTC
GGCATCGGCG GCATGCTGGC GAGCCTGACC GTCATCAGCG GCGAGTATGC ATCGAACAAA
TGGCGCAGCG CCGCGATCGG CATGCAGTCG ACCGGCTACG CGATCGGCGC CACCGCCGGC
GGCGTGATCG CCGGTTACCT GCTGTCGACG TGGGGATGGC GCAGCGTGTT CGCGTTCGGC
GGCATCCTGA CGCTGATGTC GATCCCGATG GTGCTCGCGC TGCTGCCGGA ATCGCTCGAC
TTCCTGCTCG CGCGGCGTCC GGACGACGCG CTGCCGAAAA TCAACCGCAT CCTCGCGAGA
ATGAAGCGCG CGCCGATCGA CACGCTGCCG GCCGCGACCG CTTCCGTCGG CACGGCGAAC
CCCGCGTCGA GCTGGACGGC CGTGCTGCGC GCACCGCTCA CGCGCCGCAC GATCGCGCTG
TGGATCGCGT TCTTTCTCGT GATGGGCAGC TTCTATTTCG TCGTGAGCTG GACGCCGAAA
CTGCTGGTCC AGGCCGGCAT GTCGGCATCG CAGGGCGTGA CCGGCGGCGT GCTGCTCAAT
CTCGGGGGCA TCGCGGGCGC GTCGCTCTTC AGCCTGCTGT CGACGCGGTT CGGGCTGCGC
AACCTGCTGG GCGCGACGCT GCTGCTGGGC GGCGCGCTGA TGGTCGTGTT CGGCGCGAAC
ACCGGCTCGC TCGGCATCGG CATGACGGTC GCGGTGTTCC TCGGCGCGGT GATCAATGCG
TGCGTGGCCG GCATGTATGC GCTGTCGCCG ACGCCGTATC CGGCCGAGAT CCGCACGACC
GGCATCGGTC TCGCGGTCGG CATCGGCCGC CTCGGCGCGA TCCTGTCGCC GATGACGGTC
GGCGCGCTGC TGGACGACGG CTGGTCCGTG TCCCATCTCT ATCTCGCGTT CCTCGTGCCG
CTGGCCGGCG CGGCGATCGC CGTCGCCGTG GCGGGCGCGC GCGCCGCGGC ACCGCGCCGG
CAACGCGATC CGGCGCTGTC GTAA
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| Protein sequence | MSANIRNTID ESPMSAFQTM AVTACVVLNM LDGFDVLAIA FAAPHLAAEW KLSGKEIGLL
LSAGLAGMGI GSVLIAPLAD RVGRRRIILL CLAVISTGML ACAATHSTLQ LAAARAYTGL
GIGGMLASLT VISGEYASNK WRSAAIGMQS TGYAIGATAG GVIAGYLLST WGWRSVFAFG
GILTLMSIPM VLALLPESLD FLLARRPDDA LPKINRILAR MKRAPIDTLP AATASVGTAN
PASSWTAVLR APLTRRTIAL WIAFFLVMGS FYFVVSWTPK LLVQAGMSAS QGVTGGVLLN
LGGIAGASLF SLLSTRFGLR NLLGATLLLG GALMVVFGAN TGSLGIGMTV AVFLGAVINA
CVAGMYALSP TPYPAEIRTT GIGLAVGIGR LGAILSPMTV GALLDDGWSV SHLYLAFLVP
LAGAAIAVAV AGARAAAPRR QRDPALS
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