Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5124 |
Symbol | |
ID | 6179883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2293358 |
End bp | 2294437 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684876 |
Product | vanillate monooxygenase |
Protein accession | YP_001811786 |
Protein GI | 172064135 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.14115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTCTCA AGAACGCTTG GTACGTAGCC TGCACGCCCG ATGAAATCGA CGGCAAGCCG CTGGGCCGCA AGATCTGCAA CGAGCCGATG GTGTTTTACC GCGCGGCGGA CGGCCAGGTC GCCGCACTCG AGGACTTCTG CCCGCACCGC GGCGCGCCGC TGTCGCTGGG GTTCGTGCGC GACGGCGTGC TCGTGTGCGG CTATCACGGG CTGGAAATGG GCTGCAACGG CAAGGCGACC GGCATGCCGG GCCAGCGGGT CGGCGGCTTC CCGCCGATTC GCAGCTTCCC CGTCGTCGAA CGGTACGGCT TCATCTGGGT GTGGCCGGGC GATGCGTCCG AAGCCGATCC CGCCCGGCTG CCCGCGCTGT CGTGGGCCGA GGATCCGGCC TGGGCGCACG GCGGCGGCCT GTATCACATC CGCTGCGACT ACCGGCTGAT GATCGACAAC CTGATGGACC TCACGCACGA AACGTACGTG CATGCGACGA GCATCGGCCA GAAGGAAATC GACGAAGCGC CGCCGAAGAC GACCGCCAAC GGCGACGAAG TCGTCACGAG CCGCTTCATG CAGAACGTGA TGCCTCCGCC GTTCTGGCGG ATGGCGCTGC GCGGCAACGG GCTGGCCGAC GACGTGCCGG TCGACCGCTG GCAGATCTGC CGCTTCACGC CGCCGAGCCA CGTGATGATC GAAGTGGGCG TCGCGCATGC GGGCCACGGC GGCTACGACG CGCCGGCCGA GCTGAAGGCC TCGTCGATCG TGGTCGACTT CATCACGCCC GAGACGGACA CCTCGATCTG GTACTTCTGG GGGATGGCGC GCAACTTCCG GCCCGACGAT CACGCGCTGA CCGCCGAGAT CCGCGAGGGC CAGGGCAAGA TCTTCGCCGA GGATCTCGAG ATGCTCGAGC GCCAGCAGCT CAACCTCGAG CAGTGGCCCG ACCGCAAGCT GCTCAAGCTG AACATCGACG CCGGCGGCGT GCTGTCGCGC AAGGTGATCG AGCGGCTGCT CGCCGCCGAA CAGGCGTCGA GCCCGCAGCG CCCCGTGATT CCGGTCGCGC AGATCAAGGA GGCGTCATGA
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Protein sequence | MFLKNAWYVA CTPDEIDGKP LGRKICNEPM VFYRAADGQV AALEDFCPHR GAPLSLGFVR DGVLVCGYHG LEMGCNGKAT GMPGQRVGGF PPIRSFPVVE RYGFIWVWPG DASEADPARL PALSWAEDPA WAHGGGLYHI RCDYRLMIDN LMDLTHETYV HATSIGQKEI DEAPPKTTAN GDEVVTSRFM QNVMPPPFWR MALRGNGLAD DVPVDRWQIC RFTPPSHVMI EVGVAHAGHG GYDAPAELKA SSIVVDFITP ETDTSIWYFW GMARNFRPDD HALTAEIREG QGKIFAEDLE MLERQQLNLE QWPDRKLLKL NIDAGGVLSR KVIERLLAAE QASSPQRPVI PVAQIKEAS
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