Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5092 |
Symbol | |
ID | 6181515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2259876 |
End bp | 2261045 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684844 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_001811754 |
Protein GI | 172064103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.571422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCC CCAAGGTCGT GGTCGAAGGT CTGTGCAAGG TATTTGGAAG TAACCCGCAG CAGGCGCTCG ACATGCTCGC CGCCGGTGCA ACGAAAGACG ATGTGCTCAA GCGTACCGGT CAGGTCGTCG GCGTGCACAA CGTATCGTTC GACGTGCAGG AAGGCGAAAT ATTCGTGCTG ATGGGCCTGT CCGGCTCCGG CAAATCCACG TTGATCCGCC TCGTGAACCG GCTGGTCGAT CCCAGCGCCG GCAAGGTGCT GATCGACGGG CTCGACGTTG CGTCGGCACG CCGCTCGGAG CTGACCGCGC TGCGCCGCAA GGACATGAGC ATGGTGTTCC AGTCGTTCGC GCTGATGCCG CATCGCACCG TGGTGTCGAA CGCCGCGTTC GGCCTCGAGG TCGGCGGCGT CGGCAAGAAG GAGCGCGAAC GCCGGGCAAT GGACGTGCTC GAGCAGGTCG GTCTCGCACC GTTCGCACAC AAGCTGCCGT CCGAGCTGTC GGGCGGGATG CAGCAGCGCG TCGGCCTGGC CCGCGCGCTC GCCGTGAACC CGTCGCTGAT GATCATGGAC GAGGCGTTCT CCGCGCTCGA TCCGCTCAAG CGCCGCGAGA TGCAGGACGT GCTGCTGCAA CTGCAGAAGG AACAGCGCCG CACGATCATG TTCGTGTCGC ACGATCTGGA AGAGGCGCTG CGCATCGGCA ACCGCATCGC GATCATGGAA GGCGGCCGGC TCGTGCAGGT CGGCACGCCG CAGGACATCA TCGCGAACCC GGCCGACGAC TACGTGCGCG CATTCTTCGA CGGCATCGAC ACCAGCCGCT ACCTCACCGC CGGCGACCTG ATGCAGACGG GCGCCGTGCC GACCATGTCG AAGTTCGATG CGGCGAACGT CGCGGCGACG CTGAACGGCA GCGCCGAATA CGCGTTCGTG CTCGACGCCG CACGCAAGAT CCGCGGCTTC GTCACGCGCG ATGCGCTCGG TCAGGCCACG CCGTCCGTGC GGCCGATCGA AAGCATCCGG CGCGACGCGA CGCTCGATCA TGTCGTCGCG CGCGTGGTCG CAAGCCCGAA TGCACTGCCC GTCGTCGACG ACGACGGCTG TTACTGCGGT TCGGTCGACC GCGCACTCAT CCTGAAAGCC ATCACGCGTT CGCGAGGTTC CCATGTCTGA
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Protein sequence | MDAPKVVVEG LCKVFGSNPQ QALDMLAAGA TKDDVLKRTG QVVGVHNVSF DVQEGEIFVL MGLSGSGKST LIRLVNRLVD PSAGKVLIDG LDVASARRSE LTALRRKDMS MVFQSFALMP HRTVVSNAAF GLEVGGVGKK ERERRAMDVL EQVGLAPFAH KLPSELSGGM QQRVGLARAL AVNPSLMIMD EAFSALDPLK RREMQDVLLQ LQKEQRRTIM FVSHDLEEAL RIGNRIAIME GGRLVQVGTP QDIIANPADD YVRAFFDGID TSRYLTAGDL MQTGAVPTMS KFDAANVAAT LNGSAEYAFV LDAARKIRGF VTRDALGQAT PSVRPIESIR RDATLDHVVA RVVASPNALP VVDDDGCYCG SVDRALILKA ITRSRGSHV
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