| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5090 |
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| Symbol | |
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| ID | 6179368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2257870 |
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| End bp | 2258868 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684842 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001811752 |
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| Protein GI | 172064101 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.893585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTCCG CCGCTGCCGC CGTGCCCGCC GCTTGCGTTT CACCGGTTTC GTCCCTCGCC
CATTTCGGCT TTCTTACGCT GCCGAATTTC TCGATGATCG CGTTCTCGAG CGCGGTCGAA
GTGCTTCGGA TGGCGAACTA CGTCGGGCGC GCCGACCATT ACCAGTGGTC GATCTATTCG
CTCGACGGCG CCCCCGTGCA TGCCAGCAAC GGCATCGCCG TGCGGCCGAC CCAGGCGCTC
GACTACACGA ACCTGCCCGA CGTGATGATC GTGTGCGGCG GGATTCGCAT CCGCGACGTG
GTCGACGATG GCGCGCGCGA CACGCTCGCG GCGCTCGCCG AACGCGGGCT GCCGCTCGGC
GGCATCTGTA CCGGCGCGTA TGCATTGATG TCCGGCGGGC TGCTCGACGG CTATCGCTGC
ACCGTGCACT GGGAGAACCT GTCCGCGCTG CATGCGGAGT TTCCGCAGGT GGGGTTCGCC
GACGAGCTGT TCGTCGTCGA TCGCGACCGG CTCACCTGCA CCGGCGGCAC CGCGCCGCTC
GACCTGATGC TGAACCTCGT CGGCATGCGC TTCGGCCAGC AGCTCGCCGC GCAGGTGTCC
GAGCAGTTCA TCCTCGAGCG CATCCGCAGC TCGACCGACA CGCAACCGAT TCCGGTCGAT
GCGCGCGTCG GCTTCTCGCG CGCGGAGTTG ATCGAGGTCG TGCGCCTGAT GGAGGCGAAC
ATCGAGGAGC CGCTGTCGCT CGAGGAGCTC GCGCGGCTCG TGCGGCTGTC GCAGCGGCAC
CTGCAGCGGA TGTTCAAGGT GTACCTGAAC GTCTCGCCGA CCCACTATTA CCTGACGCTG
CGGCTCAAGC GCGCGCGCGA CCTGCTGCGC ACGACCGACG CGTCGATCGC GCGCGTGACG
ACGACGTGCG GATTCCATTC GCCGTGTCAC TTCAGCAAGG CGTATCGCGC GCAGTTCGGT
CACGCACCGA GTTACGAACG GCGGCTGCCG GGGCGTTGA
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| Protein sequence | MTSAAAAVPA ACVSPVSSLA HFGFLTLPNF SMIAFSSAVE VLRMANYVGR ADHYQWSIYS
LDGAPVHASN GIAVRPTQAL DYTNLPDVMI VCGGIRIRDV VDDGARDTLA ALAERGLPLG
GICTGAYALM SGGLLDGYRC TVHWENLSAL HAEFPQVGFA DELFVVDRDR LTCTGGTAPL
DLMLNLVGMR FGQQLAAQVS EQFILERIRS STDTQPIPVD ARVGFSRAEL IEVVRLMEAN
IEEPLSLEEL ARLVRLSQRH LQRMFKVYLN VSPTHYYLTL RLKRARDLLR TTDASIARVT
TTCGFHSPCH FSKAYRAQFG HAPSYERRLP GR
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