| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5089 |
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| Symbol | |
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| ID | 6179367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2256812 |
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| End bp | 2257759 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641684841 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001811751 |
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| Protein GI | 172064100 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT TATTGATCGC AACGGTATGC GGGATCGGGA TCGCCGCGCC GATGTCGGCG
GTGTATGCGG CCGACCCGCC CGTGTGCAAG AACGTGCGCT TCGCGGACGT CGGCTGGTCC
GACATCGCGG CCACCACCGG CCTCGCGTCG ACGATGCTGC AGGGGCTCGG CTACGCGCCG
ACCAAGACGA TCGCGTCGGT GCCGATCACG TTCGCCGGCA TCAAGAGCAA GCAGATCGAC
GTGTTCCTCG GCTACTGGTC GCCGACGATG GACCCGATCA TCCAGCCGTT CACGAAGGCC
GGCACGATCA AGGTGCTCGC CACGCCCAAC CTGACCGGTG CGAAATACAC GCTCGCGGTG
CCCGACTACG TGTACCAGGG CGGCCTGAAG TCGTTCGCCG ACATCCAGAA GTACGCGGAC
AAGCTCAACG GCAAGATTTA CGGGATCGAG CCGGGCAACG ACGGCAATGC GCTGATCAAG
AAGATGATCG ACACGAATCA GTTCGGGCTC GGCAAGTTCA AGCTGGTCGA GTCGAGCGAG
GCCGGGATGC TGATCGAGGT GAACCGCGCG GCCCGCGACA AACAGTGGAT CGTATTTCTT
GGATGGGAAC CGCATCCGAT GAACGTGCAG ATGAAGATCG ATTATCTGAC CGGCGGCGAC
GACGTGTTCG GCCCGAACTA CGGCGAAGCG AAGGTGCTGA CGGCCACGCC GCCCGACTAC
GCACAGCGCT GCCCGAACGT CGCGAAGTTC GTGTCGAACC TGCAGTTCAC GACGGCGATC
GAGAACCACG TGATGGTGCC GATCATGAAC AAGGAAGACC CGAACAAGGC CGCGGCCGCG
TGGCTGAAGG CGAATCCGCA ATCGCTCGAG AAGTGGCTGG CCGGCGTGAC GACGCTCGAC
GGCAAGCCGG GCCTGCCGGC GGTGAAGGCT TATCTCGGCG TGCATTGA
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| Protein sequence | MKRLLIATVC GIGIAAPMSA VYAADPPVCK NVRFADVGWS DIAATTGLAS TMLQGLGYAP
TKTIASVPIT FAGIKSKQID VFLGYWSPTM DPIIQPFTKA GTIKVLATPN LTGAKYTLAV
PDYVYQGGLK SFADIQKYAD KLNGKIYGIE PGNDGNALIK KMIDTNQFGL GKFKLVESSE
AGMLIEVNRA ARDKQWIVFL GWEPHPMNVQ MKIDYLTGGD DVFGPNYGEA KVLTATPPDY
AQRCPNVAKF VSNLQFTTAI ENHVMVPIMN KEDPNKAAAA WLKANPQSLE KWLAGVTTLD
GKPGLPAVKA YLGVH
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