| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5080 |
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| Symbol | |
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| ID | 6180330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2249751 |
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| End bp | 2250920 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684832 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_001811742 |
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| Protein GI | 172064091 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.53942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGC TGCAGGTGGT GCACGCGCTG GCCCGGGCGA TATCGCTCGT TTGCGGGTTC
GGCGTGCTGC TGGGCATTGC CTATACGATC GCGGCCAGCG TGCTGGTCGG CCGGTTCTTT
TCCCGCGTGG CGGCGATGCC GCGCGATTTT CCGGGTGTCA CCGTCGCGAA GCCGTTGCAC
GGCGACGAAT GGCATCTTGG TCAGCATCTC GAAAGCTTCT TCGTCCAGGA TTATCCGGGG
CCGGTTCAGC ACCTGTTCGG CGTGCATGAC GCGGGCGACG CCGCGCTCGC GGCCGTCGAG
GCGCTGCGTG CGCGCCATCC GGACGCCAAC ATCACGGTCG TCGCCGATGC ACGGCTGTAC
GGCCCGAACC GCAAGGTCGC CAATCTCGTG AACATGCTGG AACATGCGGA GCATTCGGTG
CTCTGCCTTG CCGACAGCGA CGTGGTGGTC GAGCGCGATT ATTTGCGCGG CATCGTCGGC
GCGCTACAGG AGCCGGAGGT CGGCATCGTG ACGAGCGTGT ATCGCGGCGT CGCGTCGCCG
GGTTTCTGGC CCGGCGTTGC GGTCGCAATG ACGAACTACC ATTTCCTGCC GGGCGTGATC
ACCGGGCTCT TCATCGGTCG CGCGCGTCCG TGTTTCGGCC AGACGATCGC GATCACGCGC
GCGACGCTCG AACGCATCGG CGGCCTCGCG CGTTTCGCGC ATCACCTCGC CGAGGATCAC
GCGCTCGGCG AAGCGGTGCG GCAGGTCGGG GCGCGGGTCG TGATTCCGCC GTTCGTCGTC
GGGCATGCGT GTGTCGACGA CACGTTCGCC AACCTGTACG CGCACGAATT GCGCTGGAGT
TGCACGATCC GGGCGGCGGA CCGGGGCGGT CATGCCGGTT CGGTGCTGAT GCATCCGGTG
CCGCTCGCAC TGCTGGCGCT GCTGCTGTCC GGCGGTACGG CGGCCGCTTG CGCGCTGACG
GTGGCCGCGC TTGCCGCACG GGCGCTGCTG ATGGTGAGAA CGGCGCGCGC GATCGGCGCG
AGCCTGCGCG GCGCGCGCTG GTTGCCGTTC GTCGATCTGG TGCAGTTCCT GATCTTCGTG
TCGAGCTTCT TCTCGTCGCA TGTCATCTGG CGCGGCACGC GCTTTCGCGT CGACCGCGAG
GGTTTGCTGT CGCCGGCGGG GAAACCATGA
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| Protein sequence | MEWLQVVHAL ARAISLVCGF GVLLGIAYTI AASVLVGRFF SRVAAMPRDF PGVTVAKPLH
GDEWHLGQHL ESFFVQDYPG PVQHLFGVHD AGDAALAAVE ALRARHPDAN ITVVADARLY
GPNRKVANLV NMLEHAEHSV LCLADSDVVV ERDYLRGIVG ALQEPEVGIV TSVYRGVASP
GFWPGVAVAM TNYHFLPGVI TGLFIGRARP CFGQTIAITR ATLERIGGLA RFAHHLAEDH
ALGEAVRQVG ARVVIPPFVV GHACVDDTFA NLYAHELRWS CTIRAADRGG HAGSVLMHPV
PLALLALLLS GGTAAACALT VAALAARALL MVRTARAIGA SLRGARWLPF VDLVQFLIFV
SSFFSSHVIW RGTRFRVDRE GLLSPAGKP
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