| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5073 |
|---|
| Symbol | |
|---|
| ID | 6180995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2242459 |
|---|
| End bp | 2243349 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641684825 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_001811735 |
|---|
| Protein GI | 172064084 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGAA ATGTTGGAGT CATCGGCCTC GGCGCAATGG GCCTGGGCGT CGCCCGCTCG
CTGCTGCGCG CGGGCTTCCG CGTGCACGCA TGCGACGTGC GCGACACCGT GCTGCAGGCG
TTCGCGGCCG AAGGCGGCGT GGCCTGCGCG AGCCCGGCCG AACTCGGCGC GCAGTGCGAC
GTCGTCGTCA CGCTCGTCGT CAATGCCGCG CAGACTGAAA CGGTGCTGTT CGGCGAGCAC
GGCGCGGTCG CGGCGATGAA GCCGGGCGGC GTGGTGATCG CGAGCGCGAC CGTCGCGCCC
GACTTCGCGG TTGCGCTCGG CGCGCGCATC GAGGCCGCGG GCCTGCAGAT GCTCGACGCC
CCGGTGTCCG GCGGCGCCGC GCGCGCGGCG TCGGGCGAGA TGACGATGAT GACGTCGGGC
CCGGCCGCCG CGTATGCGGG TTGCGACGAC GTGCTCGCCG CGATGGCCGC CAAGGTGTAT
CGCCTCGGCG ACGCGCACGG CATCGGCTCG AAGGTGAAGA TCATCAACCA GCTGCTGGCC
GGCGTGCATA TCGCGGCGGC CGCCGAGGCG ATGGCGCTCG GCTTGCGCGA AGGCGTCGAC
GCCGACGCGC TGTACGACGT GATCACGCAC AGCGCCGGCA ATTCGTGGAT GTTCGAGAAC
CGCGTGCCGC ACATCCTGAA CGGCGACTAC ACGCCGCTGT CGGCCGTCGA CATCTTCGTG
AAGGATCTCG GCCTCGTGCT CGATACCGCG CGCCGCAGCA AGTTCCCGCT GCCGCTGTCG
GCCACCGCGC ACCAGATGTT CATGAGCGCG TCGAGCGCCG GCCACGGCGG CGAGGACGAT
TCCGCCGTGA TCAAGACTTT CCCCGGCATC ACGCTGCCGC CCGCCCGCTG A
|
|---|
| Protein sequence | MSRNVGVIGL GAMGLGVARS LLRAGFRVHA CDVRDTVLQA FAAEGGVACA SPAELGAQCD
VVVTLVVNAA QTETVLFGEH GAVAAMKPGG VVIASATVAP DFAVALGARI EAAGLQMLDA
PVSGGAARAA SGEMTMMTSG PAAAYAGCDD VLAAMAAKVY RLGDAHGIGS KVKIINQLLA
GVHIAAAAEA MALGLREGVD ADALYDVITH SAGNSWMFEN RVPHILNGDY TPLSAVDIFV
KDLGLVLDTA RRSKFPLPLS ATAHQMFMSA SSAGHGGEDD SAVIKTFPGI TLPPAR
|
|---|
| |