| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5069 |
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| Symbol | |
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| ID | 6181220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2237498 |
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| End bp | 2238742 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684821 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_001811731 |
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| Protein GI | 172064080 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.834933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT ACTCGATATT CAGCCTGTTC CGCAACGGCC TCTCGTATCA CGAGAACTGG
GAAAAGCAGT GGAAGAGCCC GGAACCGAAG AAGGAATACG ACGTCGTGAT CGTCGGCGGC
GGCGGCCACG GCCTCGCGAC CGCCTACTAC CTCGCGAAGG AACACGGCAT CACGAACGTC
GCGATCCTCG AGAAGGGCTG GATCGGCGGC GGCAACACCG CGCGCAATAC GACGATCGTG
CGCTCGAACT ACCTGTGGGA CGAATCGGCC GCGCTGTACG AGAAGGCGAT GAAGCTGTGG
GAAGGGCTGT CGCAGGACCT GAACTACAAC GTGATGTTCA GCCAGCGCGG CGTGATGAAC
CTCGCGCACA CGCTGCAGGA CGTGCGTGAC ACCGAGCGCC GCGTGAATGC GAACCGGCTG
AACGGCGTCG ACGCCGAATT CCTGACGCCC GCGCAGATCA AGGAAATCGA GCCGACGATC
AACCTGAACA GCCGCTACCC GGTGCTCGGC GCATCGATCC AGCGCCGTGC GGGCGTCGCG
CGTCACGACG CGGTGGCCTG GGGCTTCGCG CGCGGCGCCG ACCGCGCCGG TGTCGACATC
ATCCAGAACT GCCAGGTGAC GGGCATTCGC CGCGAAGGCG GCGCGGTGGT CGGCGTCGAT
ACGGTGAAGG GCTTCATCAA GGCGAAGAAG GTCGCGGTGG TGGCGGCCGG CAACACGACG
ACGCTCGCCG ACATGGCCGG CGTGCGCCTG CCGATCGAAA GCCACCCGCT GCAGGCGCTG
GTGTCCGAGC CGATCAAGCC GGTGGTCAAC TCGGTGATCA TGTCGAACGC GGTGCACGCG
TACATCAGCC AGTCCGACAA GGGCGACCTC GTGATCGGCG CGGGTATCGA CCAGTACACG
GGCTTCGGTC AGCGCGGCAG CTTCCACATC ATCGAAAGCA CGCTGCAGGC GATCGTCGAG
ATGTTCCCGG TGTTCTCGCG CGTGCGGATG AACCGCCAGT GGGGCGGCAT CGTCGACGTG
TCGCCGGACG CATGCCCGAT CATCACCAAG ACCGACGTGA AGGGCCTCTA TTTCAACTGC
GGTTGGGGCA CCGGCGGCTT CAAGGCGACG CCGGGCTCGG GCTGGGTGTT CGCGCACACG
ATCGCCCGCG ACGAACCGCA TCCGCTGAAC GCACCGTTTG CACTCGACCG CTTCTACACC
GGCCACCTGA TCGACGAGCA CGGCGCTGCC GCCGTCGCGC ACTAA
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| Protein sequence | MSRYSIFSLF RNGLSYHENW EKQWKSPEPK KEYDVVIVGG GGHGLATAYY LAKEHGITNV
AILEKGWIGG GNTARNTTIV RSNYLWDESA ALYEKAMKLW EGLSQDLNYN VMFSQRGVMN
LAHTLQDVRD TERRVNANRL NGVDAEFLTP AQIKEIEPTI NLNSRYPVLG ASIQRRAGVA
RHDAVAWGFA RGADRAGVDI IQNCQVTGIR REGGAVVGVD TVKGFIKAKK VAVVAAGNTT
TLADMAGVRL PIESHPLQAL VSEPIKPVVN SVIMSNAVHA YISQSDKGDL VIGAGIDQYT
GFGQRGSFHI IESTLQAIVE MFPVFSRVRM NRQWGGIVDV SPDACPIITK TDVKGLYFNC
GWGTGGFKAT PGSGWVFAHT IARDEPHPLN APFALDRFYT GHLIDEHGAA AVAH
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