| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5068 |
|---|
| Symbol | |
|---|
| ID | 6181219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2237161 |
|---|
| End bp | 2237472 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641684820 |
|---|
| Product | sarcosine oxidase delta subunit heterotetrameric |
|---|
| Protein accession | YP_001811730 |
|---|
| Protein GI | 172064079 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4311] Sarcosine oxidase delta subunit |
|---|
| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.344963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGA TCGAATGTCC GTGGTGCGGG CCGCGCGCCG AATCCGAGTT CACGTGCGGC
GGTGAAGCCG ACATCGTGCG CCCGGTGGCG AACGAGAACA TGACCGACCG CGAATGGGGC
GAATACGTGT TCATGCGCGA GAACAAGCGC GGGCTGCACC GCGAGCAGTG GCTGCACACG
CAGGGCTGCC GCCGCTGGTT CAAGGTCACG CGCGATACGG TGACCTACGA TATCAAGGGC
TACGAAAAGT TCGGCGGGGC TGCCAACGGC GCCGCTGCCG GCAACGCACA CGAAGAGGGC
ACGAGCAAAT GA
|
|---|
| Protein sequence | MLLIECPWCG PRAESEFTCG GEADIVRPVA NENMTDREWG EYVFMRENKR GLHREQWLHT
QGCRRWFKVT RDTVTYDIKG YEKFGGAANG AAAGNAHEEG TSK
|
|---|
| |