| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5063 |
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| Symbol | |
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| ID | 6180986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2231537 |
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| End bp | 2232223 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684815 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001811725 |
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| Protein GI | 172064074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.126997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC GGTTTTTCTG GCTGATCGTG CTTTCGCTCG GCATTGCGCA ACAGGCTTCG
GCGCAGCAGG CGCCTGCGCT GCCTGCGTCC GCCCCCGAAG CGGCCGCATC CGCACCGGTC
GCGGCATCTG CGCCGCTCGC CAACGCCAAC GATCAGCCGA ACGAAGCAAA CCGCCGCATC
ACCTCGTACC TGACGAAGAA ATTCGGCCTC GCGAAGGAGC GCGCCGCGCG GCTCGCCGAT
ATCGTGAGCA TCACTGCGAC GAAATATTCG CTGCCTCCCG CACTCGTTTA CGCGATTATC
TCGATCGAAT CGCGCTTCCA GGAAAAGGCG CGCGGCCAGC ATGGCGCGAC CGGGCTGATG
CAGGTCGTGC CGGCCGCCCA CCGCGGCCTG CTGCGCAACG TGAAGGATCT GACCGAGCCG
AATGCGAACG TCGAGGCCGG CTCCAGGATC CTGTCGGGCT ATGTGCGGGC GGCCGGCGGC
AATGTGCAGG CCGGGCTCAA GAGCTACGGC GGATCGAATG CGTATGCGGC GAAGGTGATG
CAGCGGGTCG ACGCGTTCCG GTTCGTGCTC GAACCTGAAG ACGATGCGAG CGCCGACAAA
AACCCGACAG CCCCGAACGA TACGAAGGGC CGCATGGTGC CGGTCAGCGA GACGTCGAAC
CCGGCGTCGG CCCGCAACCG CCAGTAA
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| Protein sequence | MRRRFFWLIV LSLGIAQQAS AQQAPALPAS APEAAASAPV AASAPLANAN DQPNEANRRI
TSYLTKKFGL AKERAARLAD IVSITATKYS LPPALVYAII SIESRFQEKA RGQHGATGLM
QVVPAAHRGL LRNVKDLTEP NANVEAGSRI LSGYVRAAGG NVQAGLKSYG GSNAYAAKVM
QRVDAFRFVL EPEDDASADK NPTAPNDTKG RMVPVSETSN PASARNRQ
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