Gene BamMC406_5061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5061 
Symbol 
ID6181523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2229615 
End bp2230553 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID641684813 
ProductABC transporter related 
Protein accessionYP_001811723 
Protein GI172064072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCGAACGCCT CGGCAAACGC TTCGGCGACG TCGTCGCCGT CGACGACGTG 
TCGCTGACGA TGAAGCAAGG CACGATCACC GCGCTCGTCG GCGCATCGGG CAGCGGCAAG
TCGACGCTGC TGCGGATGAT CAACCGGCTG ATCGCGCCGA CCAGCGGCAC GATCCGCATC
GACGGCGTCG ACACCGCGAG CGTTCCGCCC GAGCAGCTGC GGCGGCGCAT CGGCTACGTG
ATCCAGGGGC ACGGTCTATT CCCGCACTGG AGCGTCGCGC GCAATATCGC GACCGTGCCG
CGCCTGCTCG GCTGGCCGGC CGCGCGCATC GACGCGCGCG TGCGCGAACT GCTCGAACTG
TTTCACCTCG CGCCGTCCGA ATTCGCGGAC AAGCTGCCGC ATGAACTGTC GGGCGGCCAG
CAGCAGCGTG TCGGCGTCGC GCGCGCGCTC GCGGCCGAGC CCGCGATGCT GCTGATGGAC
GAGCCGTTCG GCGCGCTCGA TCCGATCATC CGCAACAAGG CGCAGGACGA CCTGTACGCG
CTGCAGCGCC GCCTCGGCAT CACGGTCGTG ATCGTCACGC ACGATATCGA GGAAGCGCTG
AAGCTCGGCG ACACGATCGC CGTGATGGAC GGCGGCCGGC TGCTGCAGGT CGCGTCGCCG
GCGGAGATTC TCGGCAAGCC GGCGGCAGGT GTGGTCGAAC AGCTCGTCGC GGGCGTCGAT
CGGCCGCTGC GCCTGCTCGC GCTGACGCCG ATCGATGCGG TGGCCGAATC CGGTCACGCC
GACGGCGAAC CGATCGCCGC GACGCGCACG CTGCGCGATG CGGTGTCCGA GCTGCTGTGG
CGCGGCGTCG ACGCATTGCC GGTCGACGAC GGCAACGGGC GCGATGCACG CCGCATCACG
CTCGGCGCGA TCCGCGCGCA CGCGAGGAAG CCCGCATGA
 
Protein sequence
MIEIERLGKR FGDVVAVDDV SLTMKQGTIT ALVGASGSGK STLLRMINRL IAPTSGTIRI 
DGVDTASVPP EQLRRRIGYV IQGHGLFPHW SVARNIATVP RLLGWPAARI DARVRELLEL
FHLAPSEFAD KLPHELSGGQ QQRVGVARAL AAEPAMLLMD EPFGALDPII RNKAQDDLYA
LQRRLGITVV IVTHDIEEAL KLGDTIAVMD GGRLLQVASP AEILGKPAAG VVEQLVAGVD
RPLRLLALTP IDAVAESGHA DGEPIAATRT LRDAVSELLW RGVDALPVDD GNGRDARRIT
LGAIRAHARK PA