| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5059 |
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| Symbol | |
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| ID | 6181521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2227523 |
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| End bp | 2228443 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684811 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001811721 |
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| Protein GI | 172064070 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.92599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG CCCTGCCCGC CCGGATCCTG GGCCTCGCAC TCGCCGCCGC CGTCGCGCCC
GGTGCGCATG CCGACACGCC CGTCGTGGTG TCGTCGAAGA TCGATACCGA AGGCAACCTG
CTCGGCAATG TCATCGCGCA GGTGCTGAAA GCCCACGGCA TCCCCGTCAC CGAAAAGATC
GCCCTCGGCA CGACGCCGAT CGTACGCAAG GCGCTGACGA GCGGCGAGAT CGACATCTAC
CCCGAATACA CGGGCAACGC CGCGTTCTTC TTCAACAAGG CCGACGATCC CGCGTGGAAG
AACGCAAGCC AGGGTTACGA CACCGCGAAA AAGCTCGACT ACGCGGCGAA CCATCTCGTC
TGGCTCACAC CGGCGCCCGC GAACAACACG TGGGGCGTCG CCGTGCTCGC GCCCGTCGCG
CAATCGCAGC ACCTGAAGAC CCTCTCCGAT TTCGGCAAGT GGACCGTGGG CGGCGGCAAG
GTGAAGCTTG CCGCGTCGGC CGAATTCGTG AACAGCCCAT CCGCGCTGCC GTCATTCGAA
AAGGCATACG GCTTCAAGCT GAAACCCGAC CAGCTCGTCG TGCTGTCCGG CGGCGACACC
GCGGCGACGA TCAAGGCCGC CGCAAACCAG ACCGACGGCG TGAACGCCGC GATGGTGTAC
GGCACCGATG GCGGCATCGC GTCGAGCGGC CTCGTCGTGC TCGACGACGA CAAGCACGTG
CAGCCCGTCT ATGCGCCCAC GCCGGTGATT CGCGAAGCCG CGCTGAAGGC GCATCCGCAG
ATCGCCGACT ACCTGAAGCC CGTGTTCGCG AGCCTCGACC TGAAGACGCT GCAGACGCTG
AACGCGCGCA TCCAGATCAA TGGCGAACCA GCGGCCGGCG TGGCCAAGAG CTATCTGAAG
TCGAAGGGCT TCGTCAAGTG A
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| Protein sequence | MKLALPARIL GLALAAAVAP GAHADTPVVV SSKIDTEGNL LGNVIAQVLK AHGIPVTEKI
ALGTTPIVRK ALTSGEIDIY PEYTGNAAFF FNKADDPAWK NASQGYDTAK KLDYAANHLV
WLTPAPANNT WGVAVLAPVA QSQHLKTLSD FGKWTVGGGK VKLAASAEFV NSPSALPSFE
KAYGFKLKPD QLVVLSGGDT AATIKAAANQ TDGVNAAMVY GTDGGIASSG LVVLDDDKHV
QPVYAPTPVI REAALKAHPQ IADYLKPVFA SLDLKTLQTL NARIQINGEP AAGVAKSYLK
SKGFVK
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