Gene BamMC406_5053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5053 
Symbol 
ID6181224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2220609 
End bp2221616 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID641684805 
Productaldo/keto reductase 
Protein accessionYP_001811715 
Protein GI172064064 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACC GCTATCTCGG GCGCAGCGCG CTGAAGGTGT CGCCGCTGTG TCTCGGCACG 
ATGATGTTCG GCGGCGAAAC CGATGAAGCG ACGTCGGCGC GCATCATCGA CAAGGCGTTC
GACCAGGGCG TCAACTTCAT CGACACGGCT GACGTCTACC ACGCCGGACG CTCGGAAGAA
ATCGTCGGCC GCGCGATCGC GCGGCATCGC GACAGCTGGG TCGTCGCGAC GAAGTTCGGC
TACCCGGCCG GACCGGATGC CGGGCCGAAC CGTCAGGGCC AGTCTCGTAA ATGGATCTAC
GAATCGGTCG ACGCGAGCCT GCAGCGGCTC GCCACCGATT ACATCGACAT CCTGTATTTC
CATCGCACGC TGACCGATGC GCCGCTCGAA GAAGGGATGC GCGCGGTGGC CGACCTGATC
CGGCAAGGCA AGGTGCGCTA CGTCGGGCTG TCGAATTTCA AGGGCTGGCG CATCGCCGAA
ATCGTGCGCA TCGCCGACCA GCTCGGCATC GATCGTCCGG TGGCGAGCGA ACCGCTGTAC
AACCTGGTCG ATCGCACGGC CGAGGTCGAA CAGCTGCCGG CGGCCGCGCA TTACGGCATC
GGCGTCGTTC CGTACAGCCC GCTCGCGCGC GGCGTGCTCA CCGGCAAATA CGCGCCGGAC
ACGCAACCGC CCGCCGATTC GCGTGCGGGC CGCGGCGATC GGCGCATCCA GCAGACGGAA
TGGCGGCCCG AGTCGCTGCA CATCGCACAG CAGGTGGCCG CGCATGCCGC GGCGCGCGGC
ACGACGTCCG TCGCGTTCGC GCTCGCGTGG GTGATGAAGA ACCGGATCGT CAGCTCGACG
ATCGCCGGGC CGCGCACCGA GGCGCACTGG GACAGCTATA TCGATGCGCT GACGCTCGAG
CTCGGTCCCG ACGACGAACG CTTCGTCGAT TCGCTGGTGC CGCCGGGGCA TGCGTCGACG
CACGGTTATA CGGATCCCGG CTATCCGGTC GAAGGGCGAA AGGTGTGA
 
Protein sequence
MDYRYLGRSA LKVSPLCLGT MMFGGETDEA TSARIIDKAF DQGVNFIDTA DVYHAGRSEE 
IVGRAIARHR DSWVVATKFG YPAGPDAGPN RQGQSRKWIY ESVDASLQRL ATDYIDILYF
HRTLTDAPLE EGMRAVADLI RQGKVRYVGL SNFKGWRIAE IVRIADQLGI DRPVASEPLY
NLVDRTAEVE QLPAAAHYGI GVVPYSPLAR GVLTGKYAPD TQPPADSRAG RGDRRIQQTE
WRPESLHIAQ QVAAHAAARG TTSVAFALAW VMKNRIVSST IAGPRTEAHW DSYIDALTLE
LGPDDERFVD SLVPPGHAST HGYTDPGYPV EGRKV