| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5047 |
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| Symbol | |
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| ID | 6180119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2214339 |
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| End bp | 2216108 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684799 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001811709 |
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| Protein GI | 172064058 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.153925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCCG AATTATTCGC GCAGCATCAT GATTGCCCGG GCTGGGAAGG CGAAATGGCC
CGGCGCGTCG CTGCCTTCGA CTGGTCGTCC ACCGGCCTCG GCCCGCTCGA CGGCTGGTCG
GCGAGCCTCG TCGCTGCCGT GCGCACCGTG CTCGCGTCGC CGCTGCCGCT GGTGATGCTG
TGGGGCCGGC CCGGCTACAT GATCTACAAC GACGCGTATG CCGGGTTCGC CGGCGGGCGC
CACCCCTATC TGCTCGGCCA GCCGGTCGAG CTCGGCTGGC CCGAGGTCGC CGAGTTCAAC
CGCAACGTGA TGAACACCTG CCTCGCGGGC GGCACGCTGT CGTATCGCGA CAAGGAGCTC
GTGCTGCTCC GCAGCGGGCG CCCCGAAGAC GTGTGGATGG ATCTGCATTA CAGCCCGCTG
CCCGACGACG ATGGCGCACC GGGCGGCGTG CTCGCCGTCG TGATCGAGAC GACCGAACGC
GTGCTCGCCA CGCGTCATCG CGAAAGGGCG GAAGCGGCGC TGCAGTCGTC CAACGATGCG
CTGCGCCGCC TGACCGAAAC GCTCGAGCAA CGCGTGGCCG ATGCGATCGC CGAGCGCGCG
GCCGTCGAGG AGCAGTTGCG TCACTCACAG AAGATGGAAG CGATCGGCAG CCTGACCGGC
GGCATCGCGC ACGACTTCAA CAACGTGCTG CAGGTGATCA GCGGCAACCT GCAGATTCTG
GCCGTGGAGC TCGGCGAGCG CGCGAGCGCG CAGCCGCGAA TCGAAAGCGC GAACAACGCG
GTGCGGCGCG GCGCGCAACT GGCGTCGCAC CTGCTGGCCT TCGCGCGGCG CCAGCCGTTG
TCGGCGACGG TGCTCAATCC GCACCAGCTG ATCCACGGGA TGAGCGAGAT GCTGCACCGC
GCGCTCGGCG AAACCGTGCG GATCGTCACC GCGCTGGCGC CCGATGTCGG CAACGTGCTC
GCCGACCGGC ACCAGCTCGA GAACGCGCTG CTCAATCTTG CGATCAATGC GCGCGATGCG
ATGGGCGGCG ACGGCACGCT GACGATTGCC GCGTACAACG ACGCGCATCC CGCGCAGGCC
GGCGGCGCAC GGCGCTCGCC ATTGCCGGCC GGCGAATACG TGACGTTCGA GATCAGCGAT
ACGGGTGCCG GCATGACGGC CGACGTGCTC GAGCGCGTGT TCGAACCGTT CTTCACGACC
AAGCCGGACG GCGAAGGCAC CGGGCTCGGC CTCAGCATGG TGTTCGGTTT CGTCAAGCAA
AGCGGCGGCC ATACGTCGAT CGAAAGCACG CCGGGCCAGG GCACGACCGT GCGGCTCACG
TTTCCGCGCT GTCACGATGA CTGCGCCGAA GAGCCTGCCC GCGTACCGCA GCACGATGCC
GCGCGCGGCC GCGAAACCAT CCTGGTCGTC GAGGACGACG CGGAGGTCCG GCTGACCGTG
GTCGACATGC TCACGCAGCT CGGCTACAAG GTGGTCACCG CGTCCGACGG CGAAGCCGCG
CTGCAGATAC TCGACTGCGA CACGCATATC GACCTGCTGT TTACCGACGT CATCATGCCG
GGCCGCATCA AGGGCGGCGA ACTCGCGCGC CGTGCGGCGC AGCGCACGCC GCCGTTGCCC
GTGCTGTTCA CGTCCGGCTA CACGCGCGAC GAGATCTTCC ACTCCGGGCG GCTCGACCCC
GGCGTCATGC TGCTCGGCAA GCCGTACCGC CGCGACGAAC TCGCGGCCCG GATCCGCGAC
ATGCTCGACG CGCATCCAAA GGCGGCGTGA
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| Protein sequence | MHAELFAQHH DCPGWEGEMA RRVAAFDWSS TGLGPLDGWS ASLVAAVRTV LASPLPLVML
WGRPGYMIYN DAYAGFAGGR HPYLLGQPVE LGWPEVAEFN RNVMNTCLAG GTLSYRDKEL
VLLRSGRPED VWMDLHYSPL PDDDGAPGGV LAVVIETTER VLATRHRERA EAALQSSNDA
LRRLTETLEQ RVADAIAERA AVEEQLRHSQ KMEAIGSLTG GIAHDFNNVL QVISGNLQIL
AVELGERASA QPRIESANNA VRRGAQLASH LLAFARRQPL SATVLNPHQL IHGMSEMLHR
ALGETVRIVT ALAPDVGNVL ADRHQLENAL LNLAINARDA MGGDGTLTIA AYNDAHPAQA
GGARRSPLPA GEYVTFEISD TGAGMTADVL ERVFEPFFTT KPDGEGTGLG LSMVFGFVKQ
SGGHTSIEST PGQGTTVRLT FPRCHDDCAE EPARVPQHDA ARGRETILVV EDDAEVRLTV
VDMLTQLGYK VVTASDGEAA LQILDCDTHI DLLFTDVIMP GRIKGGELAR RAAQRTPPLP
VLFTSGYTRD EIFHSGRLDP GVMLLGKPYR RDELAARIRD MLDAHPKAA
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