Gene BamMC406_5042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5042 
Symbol 
ID6179617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2208859 
End bp2210457 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content66% 
IMG OID641684794 
Producthypothetical protein 
Protein accessionYP_001811704 
Protein GI172064053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.590905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGCA TTCCTGAATG GCGGAAGGCG ATCCTGTCAT GCGCCGTGCT GGCGCTGCCG 
TTCGTCGCCG GTTGCGGCGG CGGCGACGAT CCGGGCCCGA TCAACGTGCC GCAGTGCTCG
GGCAGCGCAT GCGGGCCGAG CGGCGCCGAA ACGACGCCGC CCGTCGTGAC GAAGCTGTGT
CCGGATTCGC TCGACTACAC GACGACCTAC ACGGGCGGCG CCGGCAGCGG CGAATACGTG
AAGGTGAAGT TCGACACGAC CAAGCTGACC TATCAGATGC AGTTCATCGA ATCGTCGGTG
CCGACGTCGG CGGGGCAGGT CAACGACACG CGCGCGGGGC TGACGATCAA CGGCGCGTTC
CATCATCCGA CCAACCTGCC GACGGCCGAG CAGAACCGCT GCGCGTTCGT GCTCGACAGC
GGCGCGACGA GCGACGGCGC GTATTCGGTG ACGATCAAGC GCACCGATCC GCCGATGCTG
TTCGTCGGGA ACGGGGTGGT CGGCGGCGGG ATTCCGGGCG CGACGATTCA ATTCGACGGC
ATTCCGCTCG CGCCGGGTCT CTATATCGGC ACCGTGCCGT CGCGCACGTT CGATTTCTAT
CCGTTCATCG GCTTTACCGA CACCGAGACG GATTTCGCCA AGGTAGCCGG CGTGTACAAC
GAGGTCGGCA TTCATCTGTC GCCGACCGGC AGCAGCTATC AGACTGCCAC CCCGCAGGGC
TGGCAGCCGG ATGTCGTGAA CTGGAACCAG ACGCTCGGCG CGGACGGCAC GTGCACGATC
ACGCCGGGCA GCGACTACTC GTGCCAGACG ACCGGTACGC CGTGGACGCT GCGCAAGAAC
GCGGACGGCA GTGCCGACAA CGTGTTCGTC AGCAGCGCGA AACCGGGCTT GCCGTATCCG
TCGGCCGGCC AGGAGCAGCC GCTCGTGCTG CTGTCGCCGA CCCAGGCGCA TGGCGTGATG
ATCGTCGGCA AGCTGAACGG CGCGCTGATA CCGATCGTGA TTCGCGTCGG CTACTCGCAC
GCCGATGCGA GCAACCTGCT GGCGTCGGTC GCCGACGCGG AAGTCGGCAT CTCGATGCTG
TCGCCCGCGC AGGCCGTCGC GACGAATGTG CTGAAGGGCG GTTTCATCGG GGCGACGAGC
GCGTCCGCGT GCGGCGTCGT GATGTCCAAC GGCGTGTATG GGGCACCGGG GATTTCGGGG
CCGAGCTTCG ACAGCCTCGT GCCGCATCCG GACCTGCCCG GCACGTTCAA CGGCACGTTC
TTCATGCCCG AGGCCGGCAA CTGCACGGAC GGCAGCGCCG TGTCGACGAT TTCCGCCAAC
TACACGTCCA CGCTGTTCCA GGGCAATACC GCGGCATTCA TCGACCCGCA GACGTCGTCC
GTGAGTTCGC AGTTCGCGCT CGACTACACG CAGGCCACGC CCGGCAAGAT CAAGGTCACG
GCGTCGCAGG ACTTCAACGC GAAGGGTGCG AACGGCAACG TGGCGATCTT CAGCAAGGGC
GACACGGGCT GGCTCGTGAC GGCCGGGAAC GTCTACGCGA TGGTCGTCAA CAACAACAAG
ATCAACCCGT TCTTCACGGT CGGCGCGTTC GTCCAGTAA
 
Protein sequence
MLCIPEWRKA ILSCAVLALP FVAGCGGGDD PGPINVPQCS GSACGPSGAE TTPPVVTKLC 
PDSLDYTTTY TGGAGSGEYV KVKFDTTKLT YQMQFIESSV PTSAGQVNDT RAGLTINGAF
HHPTNLPTAE QNRCAFVLDS GATSDGAYSV TIKRTDPPML FVGNGVVGGG IPGATIQFDG
IPLAPGLYIG TVPSRTFDFY PFIGFTDTET DFAKVAGVYN EVGIHLSPTG SSYQTATPQG
WQPDVVNWNQ TLGADGTCTI TPGSDYSCQT TGTPWTLRKN ADGSADNVFV SSAKPGLPYP
SAGQEQPLVL LSPTQAHGVM IVGKLNGALI PIVIRVGYSH ADASNLLASV ADAEVGISML
SPAQAVATNV LKGGFIGATS ASACGVVMSN GVYGAPGISG PSFDSLVPHP DLPGTFNGTF
FMPEAGNCTD GSAVSTISAN YTSTLFQGNT AAFIDPQTSS VSSQFALDYT QATPGKIKVT
ASQDFNAKGA NGNVAIFSKG DTGWLVTAGN VYAMVVNNNK INPFFTVGAF VQ