| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5031 |
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| Symbol | |
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| ID | 6181423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2195629 |
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| End bp | 2197200 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684783 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001811693 |
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| Protein GI | 172064042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.654254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG CATCGCCGCT TCGGGACGCC GCCGCGTCCG CCGCGGCTGC CGCGCCACCG
GTGCGCGGCG CCCGGCTCGC GCTCCTTACG TTCGCGCTGT CGCTCGCGAC CTTCATCGAA
GTGCTCGACT CGACCGTGAC GAACGTCGCG GTGCCGGCGA TCTCCGGCAG TCTCGGCGTG
TCGAACAGCC AGGGCACGTG GGTGATCAGC TCGTATTCGG TCGCGGCCGC GATCGCGGTG
CCGCTGACCG GCTGGCTCGC GCGCCGCGTC GGCGAACGGC GGCTGTTCAT CGGCGCGGTG
CTGCTGTTCA CGCTGACGTC GCTGCTGTGC GGGCTCGCAC GCGACCTGCA CGTGCTGGTG
GTCTGCCGCG CATTGCAGGG GCTGTGCTCG GGGCCGATGG TGCCGCTGTC GCAGACGATC
CTGCTGCGCA CCTTTCCGCC GGACAAGCGC ACCGTCGCGC TCGCGCTGTG GGCGATGACG
GTGCTGCTCG CGCCGATCTT CGGGCCGGTG GTCGGCGGCT GGATCGTCGA CAGCTTCTCG
TGGCCGTGGA TCTTCCTGAT CAACCTTCCG ATCGGGCTGT TCTCGTTCGC CGTGTGCACC
GCGATGCTGC GCCCCGACGC GCAGCGCGGC GCGGCCGGCC CGATCGACGT GCCGGGCATC
ATGCTGCTCG TGATCGGCGT CGGCTCGCTG CAGGCGATGC TCGATCTCGG TCACGACGAG
GGCTGGTTCG ATTCGCCGCT GATCGTCACG CTCGCGGTGG TCGCCGGTCT CGCGATCGTG
TCGCTGCTGA TCTGGGAGGC GGGCGAAACG CATCCGGTCG TCGACCTCAG CCTGTTTCGC
GACCGCACGT TTTCGTTCTG CGTGCTGATC ATCTCGCTCG GGATGATGAG CTTCTCGGTG
GTGGGCGTCG TGTTTCCGCT GTGGATGCAG GCGGTAATGG GCTACAACGC GTTTCACGCG
GGCCTCGCCA CCGCATCGCT CGGCGTGCTC GCGCTGGTGT TCTCGATTCT CGTCGGCCTG
CATGCGCACC GCTTCGATGC ACGCGTGCTC GCGACGTTCG GCTTCCTCGT GTTCGCGACC
GTGCTCGCGT GGGACGCGCA CTTCACGCTG AAGATGACGT TCGCGCAGAT CGCCGCGCCC
GGGTTGATCC AGGGGATCGG ACTGCCGTGC TTCTTCATTC CGCTGACGGC CGCAACGCTG
TCGCGCATTC CGGACGACCG GCTCGCGGCC GCGTCGAGCC TGTCGAACTT CCTGCGCACG
CTGTCCGCCG CGTTCGGCAC CGCGATGAGC GTGACACTGT GGGACAACCG CGCGACCTAT
CACTACGACG TCGTGTCGCA ATCGGTCACG CACGCATCGA CGAACACGCA GCGCTTCGTG
CACACGCTGA ACGCGATGGG CGTGGATGGC ATGCGCGAGC TCTCCACGCT GCACCAGGTC
GTGATGCAGC AGGCGTACAT GATGGCGACG GGCGACATGT TCTGGATGGC GAGCATGACC
TGCGTCGTGC TCGCCGCGAT GATGTGGCTG ACGCGGCCGA AGCGCGGCGC CGCGGTTTCG
ATGGGACATT GA
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| Protein sequence | MSTASPLRDA AASAAAAAPP VRGARLALLT FALSLATFIE VLDSTVTNVA VPAISGSLGV
SNSQGTWVIS SYSVAAAIAV PLTGWLARRV GERRLFIGAV LLFTLTSLLC GLARDLHVLV
VCRALQGLCS GPMVPLSQTI LLRTFPPDKR TVALALWAMT VLLAPIFGPV VGGWIVDSFS
WPWIFLINLP IGLFSFAVCT AMLRPDAQRG AAGPIDVPGI MLLVIGVGSL QAMLDLGHDE
GWFDSPLIVT LAVVAGLAIV SLLIWEAGET HPVVDLSLFR DRTFSFCVLI ISLGMMSFSV
VGVVFPLWMQ AVMGYNAFHA GLATASLGVL ALVFSILVGL HAHRFDARVL ATFGFLVFAT
VLAWDAHFTL KMTFAQIAAP GLIQGIGLPC FFIPLTAATL SRIPDDRLAA ASSLSNFLRT
LSAAFGTAMS VTLWDNRATY HYDVVSQSVT HASTNTQRFV HTLNAMGVDG MRELSTLHQV
VMQQAYMMAT GDMFWMASMT CVVLAAMMWL TRPKRGAAVS MGH
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