| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5027 |
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| Symbol | |
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| ID | 6179212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2190199 |
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| End bp | 2191395 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684779 |
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| Product | formaldehyde dehydrogenase, glutathione-independent |
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| Protein accession | YP_001811689 |
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| Protein GI | 172064038 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.441343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA ATCGAGGTGT CGTCTATCTT GGGCCGGGCA AGGTCGAAGT ACAGAAGATC
GATTATCCGA AAATGGTCGA CCCGACCGGC CGCGCGATCG GCCACGGTGT GATCCTGAAA
GTGGTGAGCA CGAACATCTG CGGCTCCGAC CAGCACATGG TGCGCGGCCG CACGACCGCC
CCGGTCGGCC TCGTGCTCGG TCACGAGATC ACCGGCGAAG TGGTCGAGGT GGGCCGCGAC
GTCGAGACGC TGAAGCTCGG CGATCTCGTG TCGGTGCCGT TCAACGTCGC GTGCGGACGC
TGCGCGATGT GCAAGGACAC GCATACGGGC GTGTGCCTGA ACGTGAACCC GTCGCGAGCC
GGCGGCGCAT ACGGCTACGT CGACATGGGC GGCTGGATCG GCGGCCAGGC CGAGTACGTA
CTTGTGCCGT ACGCGGACTT CAACCTGCTG AAATTCCCGG ACCGCGATCA GGCGATGGCG
AAGATTCGCG ACCTGACCTG CCTGTCCGAC ATTCTGCCGA CCGGTTATCA CGGCGCGGTG
AGCGCGGGCG TGAAGCCGGG CTCGACGGTC TATATCGCGG GCGCGGGCCC GGTCGGGATG
GCGGCGGCTG CATCGGCGCG CCTGCTCGGC GCGGCGGTGA CCATCGTCGG CGACATGAAC
GAGGAACGCC TCGCGCATGC GCGGGCGATG GGCTTCGAGA CGGTCGACCT GTCGAAGGAC
GCATCGCTCG GCGAGCAGAT CGAGCAGATT CTCGGCGTGC CGGAAATCGA CTGCGCGGTC
GACTGCGTCG GCTTCGAGGC GCACGGCCAC GGTTCGTCGG GCCATTCCGA GGAAGCGCCC
GCGACGGTGC TGAACTCGCT GATGGAAATC ACGCGTCCGG CCGGCGCGAT CGGTATCCCC
GGCCTGTACG TGACGGACGA TCCGGGCGCG AAGGACAAGG CCGCGCAGCA CGGCAGCCTG
AGCATCCGCT TCGGCCTCGG CTGGGCGAAG TCGCACTCGT TCTTCACGGG CCAGACGCCG
GTGCTGAAGT ACAACCGCAA CCTGATGCAG GCAATCCTGT TCGACCGTCT GCCGATCGCG
AAGATCGTCA ACGTCGAGGT GATCTCGCTC GATCAGGCGC CGGAAGGCTA CAAGAAGTTC
GACGGCGGCG CGCCGCGCAA ATTCGTGATC GATCCGCACG GTTTGCTGGC GGCCTGA
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| Protein sequence | MSSNRGVVYL GPGKVEVQKI DYPKMVDPTG RAIGHGVILK VVSTNICGSD QHMVRGRTTA
PVGLVLGHEI TGEVVEVGRD VETLKLGDLV SVPFNVACGR CAMCKDTHTG VCLNVNPSRA
GGAYGYVDMG GWIGGQAEYV LVPYADFNLL KFPDRDQAMA KIRDLTCLSD ILPTGYHGAV
SAGVKPGSTV YIAGAGPVGM AAAASARLLG AAVTIVGDMN EERLAHARAM GFETVDLSKD
ASLGEQIEQI LGVPEIDCAV DCVGFEAHGH GSSGHSEEAP ATVLNSLMEI TRPAGAIGIP
GLYVTDDPGA KDKAAQHGSL SIRFGLGWAK SHSFFTGQTP VLKYNRNLMQ AILFDRLPIA
KIVNVEVISL DQAPEGYKKF DGGAPRKFVI DPHGLLAA
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