| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5025 |
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| Symbol | |
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| ID | 6179210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2187885 |
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| End bp | 2189303 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684777 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001811687 |
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| Protein GI | 172064036 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAT ATGCGGCGCT CGCGCAGACG ATTGCGGACT CGATCAGGCG TGGCGACCTC
GCGGCCGGCG CCCGGATCCC GACCGTGCGC TCGGCGTGCC GCGCCTATCG TGTGAGTCCT
TCCACCGTGT TTCGCGCGTA CTACACGCTC GAAAGCGAGG GCCTCATCGT CGCGCGCGCG
CGTTCCGGGT ATTTCGTCGC GGACCTCGAC GACAAGCGAG TGCGTACCAG CCAGGACACG
CCACGCAAGC CGGGCGCGTC GCCGACCGGC GACGACACGC TGTTCCGCTT GATCGACTCG
CTCAAGCGCG ACGACATCGT GCCGCTGGGT TCGGCATTCG CCAGCTATTC ACTGTTTCCG
ATGAGCAGCC TGTGGCGCTA CGCGGCGACG GCGGCCCGCA ACATGGACCG CGCGCAACTG
CTGGCGGGAC TGCCGCCCGG CCACGAAGCG CTGCGCCGCC AGATCGCCAT GCGCTACCTG
AACGCGGGCG CCGCATTGCC GATGGAAGAG ATCGTCATCA CGACCGGCGC GGCCGAAGCG
CTGACGCTGA GCCTGCAGGC GCTCACGCGC CCCGGCGATA TCGTCGCGAT CGAACGCCCG
GCTTTCCCCG CGGTGTTGCA GGCCGTGCAG CGGCTGCATC TGAAACCCGT CGAAATCCCG
GTCGACCCGC GCGCCGGCCT CGATCTCGAT GCACTCGCCG ATGCGCTGGA CACGCATCCG
GTGCGCGCGT GCTGGTTCAT GACCTCGCTT CACAACCCGA CCGGCGCGAC GCTGTCCGAC
GAGCGCAAGC GCGCACTGAT CGACCTGCTC GCATCGCACA AGGTGCCGCT GATCGAGGAC
GACGTGTTCG GCGAACTGCA TTTCGGGCCG TTGCCCACGC GCCCCGCGAA ACTGTACGAC
GATAGCGGGC TGGTGCTGCA TTGCGGGTCG TTCTCGAAGT GCCTCGCTCC CGGTTTCCGG
ATCGGCTGGG TCGCGGCCGG ACGCTATGTC GAACAGATCA GCCACGTGAA GAACGAAAGC
GCGCCGGCCG CCGACGTGCC CGCGCAGATG GCCGTATCGA GCTACCTGCG CGACGGCGCG
TACGACCGCT TCCTGCGCCG GCTCCGGCGC AACCTGGCCG CGCACCAGAC GCAGATGCTG
GCCGCCGTTC GCGCGTACTT TCCGCCCGAC ACGGAGGTGT ACGCACCGCG CGGCGGGTAT
TTTCTGTGGA TCGAATTGCC GCCGCACGTG GACGCGATGC AGTTGTTCGA CGACGCGATG
GACAACGGCG TCAGCCTCGC GCCCGGGCCG ATCTTTTCCG TGACGGGCGC ATTTCACCGT
TATGTCCGGC TGAACTATGG CCGGCCCTGG ACCCCTGCCG TCGAGGACGC GATGCGGACC
ATCGGGACGC TCGCCGGGCG GCAACGACAG ACGAGGTAG
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| Protein sequence | MKRYAALAQT IADSIRRGDL AAGARIPTVR SACRAYRVSP STVFRAYYTL ESEGLIVARA
RSGYFVADLD DKRVRTSQDT PRKPGASPTG DDTLFRLIDS LKRDDIVPLG SAFASYSLFP
MSSLWRYAAT AARNMDRAQL LAGLPPGHEA LRRQIAMRYL NAGAALPMEE IVITTGAAEA
LTLSLQALTR PGDIVAIERP AFPAVLQAVQ RLHLKPVEIP VDPRAGLDLD ALADALDTHP
VRACWFMTSL HNPTGATLSD ERKRALIDLL ASHKVPLIED DVFGELHFGP LPTRPAKLYD
DSGLVLHCGS FSKCLAPGFR IGWVAAGRYV EQISHVKNES APAADVPAQM AVSSYLRDGA
YDRFLRRLRR NLAAHQTQML AAVRAYFPPD TEVYAPRGGY FLWIELPPHV DAMQLFDDAM
DNGVSLAPGP IFSVTGAFHR YVRLNYGRPW TPAVEDAMRT IGTLAGRQRQ TR
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