| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5010 |
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| Symbol | |
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| ID | 6180672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2168105 |
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| End bp | 2169025 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641684762 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811672 |
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| Protein GI | 172064021 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCCAT TAGAGAGACT TATGTCGAAA TCCGAAGCGT TACCGTCGAT GCAGGCGCTG
CGCGCGTTCG AATCGGCCGC CCGTCTCCAG AGCTTCACGG CCGCCGCGCG CGAGCTCGGC
TCGACGCAGC CGGCCGTGAG CCAGCAGGTG TTCCAGCTCG AGGCGGAGCT CGGCGTGCCG
CTGTTCGAGC GCAGCCCGCG CGGCGTCACG CTGACGAGCG ACGGCCAGTG CCTGTACGAA
GCCGTACGGG TGAGTCTCGA CACGCTGCGC GGCGCCACCG CGACGCTGCG CGCGCGCCGC
GAGCACGGCG CGCTCACGAT CGTCACGGAT TTCGGCTTCG CGACCTACTG GCTGATGCCG
CGCCTCGCGG GGCTGAAGCA CGTGATGCCG GACGTCGACG TGCGGGTCGT CACGTCACAG
GATTACGACG CGCAGCGCGA CCACGCCGAC ATCGCGATCC TGTTCGGCGA CGGCCACTGG
CCGTCGTGCA CGGCCGCACG GCTCTTTCCC GAATCCGTCA CGCCCGTCTG CTCGCCCGGA
TTCCGCGCCG CGCACCCGGA TGTCGCGCGG CCCGACCATC TGCATGCGCT GCCGCTGCTG
CACGTGCAGC CGACCCGCCC CGAGCGCTGG CTGTCGTGGG CCGGCTGGTT CGACGCGCAC
GGCCTCGACG CGCCGGCCGC CGCGCGCGGC GTGACCTTCA ACAGCTACGC GCTGGTGATC
CATGCGGCGC TCCTCGGCGA GGGCGTCGCG CTCGGCTGGT CGCCGCTCGT CGACGAGCTC
GTCGCGTCCG GGCAGCTCGT GAAACTCGTC GACGCGCCCG TCGTGACGTC GCGCGGCTAT
TTCCTGGTGC GGCCGCCGCA GCGGCCCGAG CCGGACGCGA CCCACGTGTT CCGGCGCTGG
CTGCTCGACG CGTGCGCGTG A
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| Protein sequence | MGPLERLMSK SEALPSMQAL RAFESAARLQ SFTAAARELG STQPAVSQQV FQLEAELGVP
LFERSPRGVT LTSDGQCLYE AVRVSLDTLR GATATLRARR EHGALTIVTD FGFATYWLMP
RLAGLKHVMP DVDVRVVTSQ DYDAQRDHAD IAILFGDGHW PSCTAARLFP ESVTPVCSPG
FRAAHPDVAR PDHLHALPLL HVQPTRPERW LSWAGWFDAH GLDAPAAARG VTFNSYALVI
HAALLGEGVA LGWSPLVDEL VASGQLVKLV DAPVVTSRGY FLVRPPQRPE PDATHVFRRW
LLDACA
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