Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5004 |
Symbol | |
ID | 6179894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2159007 |
End bp | 2159690 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684756 |
Product | putative hydroxylase |
Protein accession | YP_001811666 |
Protein GI | 172064015 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTAC ACATCCCGAA CGTGCTGACG CCCGAGCAGG TAAGCATGCT GCGCGACCGG CTCGACCGCG CCGGCGACGC GTGGGTGGAC GGCCGGGCGA CGGCCGGCTA TACGGGCGCG CCGGTCAAGC GCAACCAGCA GATCGCCGAG CATTCGCCGG TCGCGCGCGA ACTCGGCGAC GTGATCCTCG CCGCGCTCGA GCGCAATCCG CTGTTCATCA GCGCGGCGCT CCCGAACCAG GTCTATCCGC CGCTGTTCAA CCGCTATGAA GGCGGGATGA CGTTCGGCAG TCACGTCGAC GGCGCGGTGC GCGTGCTGCC GAACGGCGTG AAGCTGCGCA CCGACGTGTC CGTCACGCTG TTCCTGTCCG CGCCCGACGA ATACGACGGC GGCGAACTCG TGATCGAGGA CGCGTACGGC GTGCAGCAGG TCAAGCTGCC GGCCGGCGAC ATGATCGTCT ATCCGGCGAC GAGCCTGCAC CAGGTCACGC CGGTCACGCG CGGCGTGCGC GTCGCGAGCT TCTTCTGGGT GCAGAGCCTC GTGCGCAGCG ACGCGCAGCG CGCGCTGCTG TTCGACATGG ACACCGCGAT CCAGCGGCTC AACGCGAGCG GCGCCGATAC CGAGGCATGC CGCAGCCTGG TCGGCTGTTA TCACAATCTT TTGAGAATCT GGAGCGAAAC GTGA
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Protein sequence | MLVHIPNVLT PEQVSMLRDR LDRAGDAWVD GRATAGYTGA PVKRNQQIAE HSPVARELGD VILAALERNP LFISAALPNQ VYPPLFNRYE GGMTFGSHVD GAVRVLPNGV KLRTDVSVTL FLSAPDEYDG GELVIEDAYG VQQVKLPAGD MIVYPATSLH QVTPVTRGVR VASFFWVQSL VRSDAQRALL FDMDTAIQRL NASGADTEAC RSLVGCYHNL LRIWSET
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