Gene BamMC406_5004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5004 
Symbol 
ID6179894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2159007 
End bp2159690 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID641684756 
Productputative hydroxylase 
Protein accessionYP_001811666 
Protein GI172064015 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTAC ACATCCCGAA CGTGCTGACG CCCGAGCAGG TAAGCATGCT GCGCGACCGG 
CTCGACCGCG CCGGCGACGC GTGGGTGGAC GGCCGGGCGA CGGCCGGCTA TACGGGCGCG
CCGGTCAAGC GCAACCAGCA GATCGCCGAG CATTCGCCGG TCGCGCGCGA ACTCGGCGAC
GTGATCCTCG CCGCGCTCGA GCGCAATCCG CTGTTCATCA GCGCGGCGCT CCCGAACCAG
GTCTATCCGC CGCTGTTCAA CCGCTATGAA GGCGGGATGA CGTTCGGCAG TCACGTCGAC
GGCGCGGTGC GCGTGCTGCC GAACGGCGTG AAGCTGCGCA CCGACGTGTC CGTCACGCTG
TTCCTGTCCG CGCCCGACGA ATACGACGGC GGCGAACTCG TGATCGAGGA CGCGTACGGC
GTGCAGCAGG TCAAGCTGCC GGCCGGCGAC ATGATCGTCT ATCCGGCGAC GAGCCTGCAC
CAGGTCACGC CGGTCACGCG CGGCGTGCGC GTCGCGAGCT TCTTCTGGGT GCAGAGCCTC
GTGCGCAGCG ACGCGCAGCG CGCGCTGCTG TTCGACATGG ACACCGCGAT CCAGCGGCTC
AACGCGAGCG GCGCCGATAC CGAGGCATGC CGCAGCCTGG TCGGCTGTTA TCACAATCTT
TTGAGAATCT GGAGCGAAAC GTGA
 
Protein sequence
MLVHIPNVLT PEQVSMLRDR LDRAGDAWVD GRATAGYTGA PVKRNQQIAE HSPVARELGD 
VILAALERNP LFISAALPNQ VYPPLFNRYE GGMTFGSHVD GAVRVLPNGV KLRTDVSVTL
FLSAPDEYDG GELVIEDAYG VQQVKLPAGD MIVYPATSLH QVTPVTRGVR VASFFWVQSL
VRSDAQRALL FDMDTAIQRL NASGADTEAC RSLVGCYHNL LRIWSET