| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4987 |
|---|
| Symbol | |
|---|
| ID | 6180779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2140973 |
|---|
| End bp | 2141677 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641684739 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001811649 |
|---|
| Protein GI | 172063998 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACAG ATCCTGTTCG GCTCAACTTT TATCAGGGCA CCGGAGGTTA TGCATGGCAG
CTCGCCGAAT ACCTGCTGGG CCACCACGCC GACGCTAATG ACGGTAATGT CAGCTATATC
CTCAGCAAGT CAATGCCGCC GGAACTGCGG AACCCGCTTG CAACCTGCCC CGAGTGGCTG
GCGCCGGACC GCTCGGTCAG ATGGTCCAGG TCAACACGCA TTGCTCCCAA TACGCCCCAG
CTTGTAGGTA CACGGGGAAA GCGATCATCG CTTGTCGTCG TTGCGAGCGC GCAAGCGTTC
GGAGGATTTC GCCAGGACGA CGTCGAGGCG CTCACAGAAG GGACAACCGT TAGGGAATTG
CCGCGCATGG AAATCAATGG CGTGGTGCAT GAGGCGTGCA CGCTATTGGT TGCACTATAT
CGACATGGGT TCATCGAGAC TGACCAGGTA TTCCCTGCGT CTCCGCCAGC TCGCTATCTG
ATCGAACCCA CCTGCATCGT TACGACCGCC GCAGGAATCG GATGCGTCGC CATCAACCAG
CTTAACGGTC GAACAATTCG TTTGAGCGAA ACCTCTCAAC GCATCTTCTC CACGGCCAAA
CCCACAACCG AGATATCTGA GCCATTGCCC CCGAACATCG TCCGCTTCGT GGAAGCTGGC
ATGTTGAGAT TGATTTCTGG AGAGAACGCC CGTGCACATG ATTAG
|
|---|
| Protein sequence | MRTDPVRLNF YQGTGGYAWQ LAEYLLGHHA DANDGNVSYI LSKSMPPELR NPLATCPEWL
APDRSVRWSR STRIAPNTPQ LVGTRGKRSS LVVVASAQAF GGFRQDDVEA LTEGTTVREL
PRMEINGVVH EACTLLVALY RHGFIETDQV FPASPPARYL IEPTCIVTTA AGIGCVAINQ
LNGRTIRLSE TSQRIFSTAK PTTEISEPLP PNIVRFVEAG MLRLISGENA RAHD
|
|---|
| |