Gene BamMC406_4986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4986 
Symbol 
ID6181358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2140088 
End bp2140966 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID641684738 
Productmethyltransferase type 12 
Protein accessionYP_001811648 
Protein GI172063997 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TAGGGCGCTT CGGATCGAAG CCAGACGATA CGAAATCGAT CACACTGCAA 
GCCCCTTTGG ATCGCATCGT GACATCGGGT ATCGCAGATC TCAGAATCAG TCACTACTAC
TTCGACGAGC CGCTATTCGA CGAATACGAA TTGACGACGG TCCGAGCGAC GTGGGATTTT
GCCGCCGCGG AGTCCATTGT CCACGATGGA CACTGTGTTC TCGATCTCGG CTGCGGTGAT
GGTCGTCTGC TCCTGCATCT CGCCGGGAAA TTCGCATTGA AGGAAAGCTT CGGCATCGAC
ATCTCCCCCG TCGCCATCGA TCGCTTCAAT GCGTCCATCG GTCACCGCCA CATTCACGCG
CTCCGCGGCG ACATCTTTGA TCTGCCGACG ACAATCACAC AACGTCGCTT CGACGTCGTT
ACGTTCGGCG ATGCCACCGT CAATTTCATT CTGGACGACG ATAAACTCGA AGGGCTGTTG
CGTAGCGCGA AGGCGCAGCT GCGCAACTCC GAATCGAGGA TCATGGTCGC CGTCTTCGGT
GATGGCACCC CCGAGCGTCT TTCATTCATG GACAAACGAT GTACGGTGGT GCCGTTTCGG
CGGAGTAACG GAAAAGCCGC GCTCATCTGG TGGGCCTACA AATACGACAG CGACAAACTG
ATCATGCATC GCTCGGTCTT TGCTCAGTCG GGATTGAATG AAGATGGGAA TATCGAAGGG
GTCGTTTGTG ATCTTCGAGA CCGAATGTGG ACACCATCGG CACTGGTTCC CATCGCGGAA
GCCAGCGGCC TCAAAGTCGA ACAAGTGATC GAATCCGACG TGCAAGACGG GGCCGCGGTG
GGCATGGCAA CAGCAATCGT CATCTTGAAA TCGGCGTGA
 
Protein sequence
MENIGRFGSK PDDTKSITLQ APLDRIVTSG IADLRISHYY FDEPLFDEYE LTTVRATWDF 
AAAESIVHDG HCVLDLGCGD GRLLLHLAGK FALKESFGID ISPVAIDRFN ASIGHRHIHA
LRGDIFDLPT TITQRRFDVV TFGDATVNFI LDDDKLEGLL RSAKAQLRNS ESRIMVAVFG
DGTPERLSFM DKRCTVVPFR RSNGKAALIW WAYKYDSDKL IMHRSVFAQS GLNEDGNIEG
VVCDLRDRMW TPSALVPIAE ASGLKVEQVI ESDVQDGAAV GMATAIVILK SA