Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4977 |
Symbol | |
ID | 6180099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2129472 |
End bp | 2129960 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684729 |
Product | thioesterase-like protein |
Protein accession | YP_001811639 |
Protein GI | 172063988 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.603539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCG ATACCCCGCT GACGATATAC CGCGACGTCG TGCGACCCGA GTGGGTCGAC TACAACGGCC ATCTGCGCGA CGCGTTCTAT CTGCTGATCT TCAGTTTCGC GACCGATGCG CTGCTGGAGC GCATCGGTCT TGACGATGCC GCGCGTCGCG AGCGGGGCCG CTCGGTCTAT ACGCTCGAAG CGCACGTGAA CTATCTGCAG GAGATCAAGG AAGGCACGCG CGTGCGCGTC GATGCGCGGG TGTTCGCGCA CGACGCGAAG CGGCTGCACC TGTATCTCGA ACTGTTCGCG GACGGGCACG ACGGCGCGGT GTCGGCGAGC GAGCAGATGC TGCTGCACGT CGACACGCGC GGCGGCGCGA AATCGGCGCC GTTCGACGAC GACGTCGCCG CGCGCGTGAC CGAACTGCAT GCGCTGCAGC GCGATTGCGC GGCGCCCGCG TATGCGGGCC GCGTGATCGG CCTGCCGCCG CGCCGCTAG
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Protein sequence | MNGDTPLTIY RDVVRPEWVD YNGHLRDAFY LLIFSFATDA LLERIGLDDA ARRERGRSVY TLEAHVNYLQ EIKEGTRVRV DARVFAHDAK RLHLYLELFA DGHDGAVSAS EQMLLHVDTR GGAKSAPFDD DVAARVTELH ALQRDCAAPA YAGRVIGLPP RR
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