| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4976 |
|---|
| Symbol | |
|---|
| ID | 6180098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2128490 |
|---|
| End bp | 2129446 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641684728 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001811638 |
|---|
| Protein GI | 172063987 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.378694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAC CGGAAATCGC GGCGTTCGTG TCGGCTGTCG ACGCGGCGTA TCCGGCCGGC
GCGGCGGCGC GCTCGCCCGA TGAGCAACGC CGTCTCTACG ATCGTTTCGC GGCCGCATGG
ACGCCCGCCG AACTGCCGGC CGGCATCGTG CAGCACGATG CGGTGTGGCA CGCACCGCAC
GAACATGCGA TCGCGCTGCG GCGCTACGCG CCGGCTCACG GCGAACCGCG CGGCACCGTG
CTGTTCTTTC ATGGCGGCGG GTTCGTCGTC GGCTCGCTCG ACAGTCACGC GCTGATCACC
GCGCAACTGG CGGCCGACAC GGGGCTGGCC GTGATCGCGG TCGATTACCG GCTCGCGCCC
GAGCATCGCG CGCCGGCCGC GCTCGAGGAT TGCCTGGCCG TCACGCGAGC CGCGCGCGAT
GCTTGCTGGT CGTTCGGCTC GTGCGCGCGA CCACTGACGC TCGCGGGTGA CAGCGCGGGC
GGCAATCTCG CGGCCGCCGT CGCAACCGCG CTGCGCGATG CAGGCGAAGG CGGCATCGAG
GGGATCGCAC TCGTGTATCC GATGCTCGGC ATCGAACCGC AATCGCCGGC GCGCGAAACG
CAAGCGCACG CGCCGATGCT GACGCTCGAC GACGTCCATC GCTATCGCGC GTTGTACTGG
GGCGAGGAAC AACACATTGC GCCGGGCGAT GACGATCCGC TGCTGCGTGC ATCGGTGCCG
CTCGCGGCAT CGCGTTTCGA CGGGCTGCCG CCGGTGCTCG CGATCGGCGC GGAACACGAT
CCGCTGCGCG ACGATGCGCG TATCTATGTC GAACGGATTC ACGCGGCCGG GGGCGCCGCG
CGTTACTGGA TGGGGAAGGG GCTGGTGCAC GGCTGCTGGC GCGCGCTCGG AACGAGCCCG
CAGGCGGCGC GGATGCACCG GATGGTCGGC GAGTTTCTGC TCGCACCACA TGCGTAG
|
|---|
| Protein sequence | MLEPEIAAFV SAVDAAYPAG AAARSPDEQR RLYDRFAAAW TPAELPAGIV QHDAVWHAPH
EHAIALRRYA PAHGEPRGTV LFFHGGGFVV GSLDSHALIT AQLAADTGLA VIAVDYRLAP
EHRAPAALED CLAVTRAARD ACWSFGSCAR PLTLAGDSAG GNLAAAVATA LRDAGEGGIE
GIALVYPMLG IEPQSPARET QAHAPMLTLD DVHRYRALYW GEEQHIAPGD DDPLLRASVP
LAASRFDGLP PVLAIGAEHD PLRDDARIYV ERIHAAGGAA RYWMGKGLVH GCWRALGTSP
QAARMHRMVG EFLLAPHA
|
|---|
| |