| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4975 |
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| Symbol | |
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| ID | 6180097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2127271 |
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| End bp | 2128467 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684727 |
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| Product | gamma-butyrobetaine dioxygenase |
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| Protein accession | YP_001811637 |
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| Protein GI | 172063986 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | [TIGR02409] gamma-butyrobetaine hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.268586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG CGCAACACCG TATCGAGGAC TGGCGGACTT TCTCCGTCGA CGCGGCCATC
GCGACGGCGA CGATCGGCGA TGGCGCGGTG GACGTCGAGT GGAGCGACAC GCGACGATCG
CCGTTTCACT TCGACTGGTT GCGCGACAAC TGCGCGTGTT CCGCGTGCGT GCATGCGCTC
ACGCGCGAAC AGGTGTTCGA GATCGCCGAC GCGCGCGAGG ATCTGTCGGC ACGCATCGTG
CATGTCGACA CCGACGGCGC GCTGCACGTC GAGTGGAACG ACGGGCATCG CAGTACCTGG
GCGCCGGGAT GGTTGCGCGC GCATGCATAC GACGATGCGT CGCGCGCCGA GCGTCAGGCC
GCGCACGGGC GGCACGTGTG GGCCGGCGAC GACGCGACGG CGATCGGCGT GTTCGCGTGG
CGTGACGTGA TGGAGGACGA CGGCACGTTG CTCGCATGGC TCGCCGCGTT GCAGCGCACG
GGGCTGACGC TCGTCGAGGG TGTGCCGGCC GAACGCGGCC GGGTCGACCA GATCGCGCGT
CGTATCGGCC TGATTCGTGA AAGCAATTTC GGCGTGCTGT TCGACGTCGA ATCGAAGCCG
CGCCCGGACA GCAACGCCTA TACGTCGCTC AACCTGCCGC CGCACACCGA CCTGCCGACG
CGTGAATTGC AGCCGGGCGT GCAGTTCCTG CATTGCCTCG CGAACGACGC AACGGGCGGG
GACAGCGTCT TCCTCGACGG CTTCGCGCTC GCGGATTCGC TGCGGCGCGA ATATCCGACC
GATTTCGGGC ACCTAGCGTC GACACCGTTC GAGTTCTGGA ACAAGAGTGC GGACAGTGAC
TACCGCTGTT CGGCGCCCGT GATCGGGCTC GATGCGCGCG GCAACGTGAC CGAGGTGCGC
GTCGCGAATT TCCTGCGCGG GCCGCTCGAT GCGCCGGCCG ATGCGGTGGC GGCTGTCTAT
CGTGCCTATC GGCGTTTCCT CACGCTTGCG CGCGAGCCGC GCTTTCGTGT GCAACGCCGG
CTGCGGGCCG GCGACATGTG GGCGTTCGAC AACCGGCGCG TGCTGCACGC ACGCACCGAG
TTCGATCCGT CGACGGGCCG CCGCCATCTG CAGGGATGTT ACGTCGATCG CGACGAACTG
CTGTCGCGGT GGCGAGTGTT GTCGCGCACG GTGCCTGCGG CAGCCGCGGC GCGCTGA
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| Protein sequence | MQAAQHRIED WRTFSVDAAI ATATIGDGAV DVEWSDTRRS PFHFDWLRDN CACSACVHAL
TREQVFEIAD AREDLSARIV HVDTDGALHV EWNDGHRSTW APGWLRAHAY DDASRAERQA
AHGRHVWAGD DATAIGVFAW RDVMEDDGTL LAWLAALQRT GLTLVEGVPA ERGRVDQIAR
RIGLIRESNF GVLFDVESKP RPDSNAYTSL NLPPHTDLPT RELQPGVQFL HCLANDATGG
DSVFLDGFAL ADSLRREYPT DFGHLASTPF EFWNKSADSD YRCSAPVIGL DARGNVTEVR
VANFLRGPLD APADAVAAVY RAYRRFLTLA REPRFRVQRR LRAGDMWAFD NRRVLHARTE
FDPSTGRRHL QGCYVDRDEL LSRWRVLSRT VPAAAAAR
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