| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4971 |
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| Symbol | |
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| ID | 6179521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2123700 |
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| End bp | 2124464 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684723 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811633 |
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| Protein GI | 172063982 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGC AGGGCAAGCG TGCGCTGGTG ACGGCGGCCG GGCAGGGTAT CGGCCGCGCG
ACCGCGCTGC GGTTCGCAAG CGAGGGCGCC GACGTGCTGG CGACCGACAT CAACGAAGCC
GCGCTCGCGC AGCTCGCGGC CGACGCCGAA CGCGCGGGCG GCCGTCTGGC GACGCGGCGG
CTCGACGTGA CCGACGCCGG CGACGTCGCG GCACTCGCCG CGCAGGAGCG CGCGTTCGAC
GTGCTGTTCA ACTGCGCCGG CTATGTGCAC CACGGCTCGA TCCTCGACTG CGACGACACC
GCCTGGGCGT TCTCGCTGAA CCTGAACGTC ACGTCGATGT ACCGGCTGAT CCGCGCGCTG
TTGCCGGCGA TGCTGGAAGC GGGCGGCGCG TCGATCATCA ACATGGCGTC GGCCGCGTCG
AGCGTGAAGG GTGTGCCGAA CCGCTTCGTC TACGGCACGA CCAAGGCGGC CGTGATCGGC
CTGACCAAGT CGGTTGCCGC CGATTTCGTC GAGCAGCGCA TTCGCTGCAA CGCGATCTGC
CCGGGCACGA TCGAGTCGCC GTCGCTGGAG CAGCGCATCG CCGAACAGGC GCGCACGCGC
CAGGTGTCGA CCGACACGGT GCGCCAGGCG TTCGTCGCGC GGCAGCCGAT GGGCCGCATC
GGCACCGCGG ATGAAGTCGC CGCGCTCGCG CTGTATCTGG CGTCCGACGA AGCGTCGTTC
ACGACCGGCG CGATTCACCT GATCGATGGC GGCTGGTCGA ACTGA
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| Protein sequence | MRLQGKRALV TAAGQGIGRA TALRFASEGA DVLATDINEA ALAQLAADAE RAGGRLATRR
LDVTDAGDVA ALAAQERAFD VLFNCAGYVH HGSILDCDDT AWAFSLNLNV TSMYRLIRAL
LPAMLEAGGA SIINMASAAS SVKGVPNRFV YGTTKAAVIG LTKSVAADFV EQRIRCNAIC
PGTIESPSLE QRIAEQARTR QVSTDTVRQA FVARQPMGRI GTADEVAALA LYLASDEASF
TTGAIHLIDG GWSN
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