Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4970 |
Symbol | |
ID | 6179520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2122818 |
End bp | 2123660 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684722 |
Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
Protein accession | YP_001811632 |
Protein GI | 172063981 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC TGAGATTTGG CGACAAACAC CATGAGAAAC CGGGCCTGCT CGATGCGCAG GGAATGATCC GCGACCTGTC GGGCGTGATC GACGATATCG CCGGCGACGC ACTGACACCC GCGTCGCTCG CGCGGCTGCG CGACATCGAC CCGTCGTCGT TGCCGCGCGT CGAAGGCGCG CCGCGGCTCG GCGCATGCGT CGGCCGCGTC GGCAAGTTCA TCTGCATCGG GCTCAATTAT TCGGATCACG CGGCCGAATC GGGCATGGAC GTCCCGAAGG AGCCGGTCGT GTTCGGCAAA TGGACGAGCG CGATTTCCGG GCCGAACGAC GACGTCGAGA TTCCGCGCGG CTCGGAGAAG ACCGACTGGG AAGTCGAGCT CGGTGTCGTG ATCGGCCAGG GCGGCCGCTA TATCGACGAA GCCGACGCGC TGTCGCACGT CGCCGGCTAC TGCGTGGTGA ACGACGTGTC GGAGCGCGAA TACCAGCTCG AGCGCGGCGG CACGTGGGAC AAGGGCAAGG GCAACGACAC GTTCGGCCCG CTCGGCCCGT GGCTCGTGAC GGCCGACGAA GTGCCCGATC CGCACGCGCT GCGGCTGTGG CTGGAGGTGG ACGGCCATCG CTACCAGAAC GGCACGACCG CGACGATGGT GTTCCGCGTG CCGCACCTGA TCAGCTACCT GAGCCGCTTC ATGAGCCTGC AGCCGGGCGA CGTGATCTCG ACCGGCACGC CGCCGGGCGT CGGGCTCGGC CAGAAGCCGC CCGTCTATCT GCGCGCCGGG CAGGTGATGA CGCTCGGCAT CGACGGGCTC GGCGAGCAGC GCCAGCGCAC CGTGCAGGCC TGA
|
Protein sequence | MKLLRFGDKH HEKPGLLDAQ GMIRDLSGVI DDIAGDALTP ASLARLRDID PSSLPRVEGA PRLGACVGRV GKFICIGLNY SDHAAESGMD VPKEPVVFGK WTSAISGPND DVEIPRGSEK TDWEVELGVV IGQGGRYIDE ADALSHVAGY CVVNDVSERE YQLERGGTWD KGKGNDTFGP LGPWLVTADE VPDPHALRLW LEVDGHRYQN GTTATMVFRV PHLISYLSRF MSLQPGDVIS TGTPPGVGLG QKPPVYLRAG QVMTLGIDGL GEQRQRTVQA
|
| |