Gene BamMC406_4970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4970 
Symbol 
ID6179520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2122818 
End bp2123660 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID641684722 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_001811632 
Protein GI172063981 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGAGATTTGG CGACAAACAC CATGAGAAAC CGGGCCTGCT CGATGCGCAG 
GGAATGATCC GCGACCTGTC GGGCGTGATC GACGATATCG CCGGCGACGC ACTGACACCC
GCGTCGCTCG CGCGGCTGCG CGACATCGAC CCGTCGTCGT TGCCGCGCGT CGAAGGCGCG
CCGCGGCTCG GCGCATGCGT CGGCCGCGTC GGCAAGTTCA TCTGCATCGG GCTCAATTAT
TCGGATCACG CGGCCGAATC GGGCATGGAC GTCCCGAAGG AGCCGGTCGT GTTCGGCAAA
TGGACGAGCG CGATTTCCGG GCCGAACGAC GACGTCGAGA TTCCGCGCGG CTCGGAGAAG
ACCGACTGGG AAGTCGAGCT CGGTGTCGTG ATCGGCCAGG GCGGCCGCTA TATCGACGAA
GCCGACGCGC TGTCGCACGT CGCCGGCTAC TGCGTGGTGA ACGACGTGTC GGAGCGCGAA
TACCAGCTCG AGCGCGGCGG CACGTGGGAC AAGGGCAAGG GCAACGACAC GTTCGGCCCG
CTCGGCCCGT GGCTCGTGAC GGCCGACGAA GTGCCCGATC CGCACGCGCT GCGGCTGTGG
CTGGAGGTGG ACGGCCATCG CTACCAGAAC GGCACGACCG CGACGATGGT GTTCCGCGTG
CCGCACCTGA TCAGCTACCT GAGCCGCTTC ATGAGCCTGC AGCCGGGCGA CGTGATCTCG
ACCGGCACGC CGCCGGGCGT CGGGCTCGGC CAGAAGCCGC CCGTCTATCT GCGCGCCGGG
CAGGTGATGA CGCTCGGCAT CGACGGGCTC GGCGAGCAGC GCCAGCGCAC CGTGCAGGCC
TGA
 
Protein sequence
MKLLRFGDKH HEKPGLLDAQ GMIRDLSGVI DDIAGDALTP ASLARLRDID PSSLPRVEGA 
PRLGACVGRV GKFICIGLNY SDHAAESGMD VPKEPVVFGK WTSAISGPND DVEIPRGSEK
TDWEVELGVV IGQGGRYIDE ADALSHVAGY CVVNDVSERE YQLERGGTWD KGKGNDTFGP
LGPWLVTADE VPDPHALRLW LEVDGHRYQN GTTATMVFRV PHLISYLSRF MSLQPGDVIS
TGTPPGVGLG QKPPVYLRAG QVMTLGIDGL GEQRQRTVQA