| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4965 |
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| Symbol | |
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| ID | 6181341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2116768 |
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| End bp | 2117709 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684717 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001811627 |
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| Protein GI | 172063976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.111268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGGA GCAAGGTGTT GAACGCGATC GTCGGGCTGA CGTTCGCCGT CGGCGTGACG
GCCGGCGCGC AGGCGCAGGA AGCCTATATC CCGCTGATCT CGAAGGGCTT CCAGCATCAG
TTCTGGCAGG CCGTGAAAGC GGGCGCGATG CAGGCCGCGA AGGACTACAA GGTGAAGGTG
ACGTTCGAAG GTCCCGAAAC CGAGGCGATG GTCGACAAGC AGATCGACAT GCTGTCCGCC
GCGATCGCGA AGAAGCCCGC CGCGCTCGGC TTCGCCGCGC TCGACAGCAA GGCCGCGCTG
CCGCTGTTGA AGAAGGCGCA GGCCGAGAAG ATCCCCGTGA TCGCGTTCGA CTCGGGCGTC
GACAGCGACA TCCCGGTGAC GACGGCCGCG ACCAACAACA AGGCTGCCGC CTCGCTCGCC
GCGGACAAGC TCGCCGCGCT GATCGGCGAC GAAGGCGAGG TCGCCGTGGT CGCGCACGAT
CAGACGAGCC GCACCGGCAT CGACCGCCGC GACGGCTTTC TCGAAAGGAT GAAGTCGGCG
CATCCGAAGG TGCGGGTCGT GACCGTGCAG TATGGCGAAG GCGACCAGCT GAAGTCGACC
GAGGTGACGA AGTCGATTCT GCAGGCGTAT CCGAAGCTCA AGGGCCTGTT CGGCACCAAC
GAAGGCTCGG CGATCGGCGT GGTGAATGGC GTGCGCGAGA TGAAGCGCAA GGTCGTGATC
GTCGGCTACG ATTCGGGCAA GCAGCAGAAG GACGCCATCC GCAGCGGACT GATGGCCGGC
GCGATCACGC AGAATCCGAT CGGGATCGGC TACAAGACCG TCGAGGCGGC CGTGAAGGCG
ATCAAGGGCG AGAAGCTGCC GAAGGTCATC GATACCGGTT TCTACTGGTA TGACAAGACC
AATATCGACG ACCCGAAGAT CTCGGCGGTG CTGTACGACT GA
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| Protein sequence | MIRSKVLNAI VGLTFAVGVT AGAQAQEAYI PLISKGFQHQ FWQAVKAGAM QAAKDYKVKV
TFEGPETEAM VDKQIDMLSA AIAKKPAALG FAALDSKAAL PLLKKAQAEK IPVIAFDSGV
DSDIPVTTAA TNNKAAASLA ADKLAALIGD EGEVAVVAHD QTSRTGIDRR DGFLERMKSA
HPKVRVVTVQ YGEGDQLKST EVTKSILQAY PKLKGLFGTN EGSAIGVVNG VREMKRKVVI
VGYDSGKQQK DAIRSGLMAG AITQNPIGIG YKTVEAAVKA IKGEKLPKVI DTGFYWYDKT
NIDDPKISAV LYD
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