Gene BamMC406_4963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4963 
Symbol 
ID6181416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2115001 
End bp2115762 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID641684715 
ProductGntR domain-containing protein 
Protein accessionYP_001811625 
Protein GI172063974 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0466274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.472298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC AGCCGATTCA GAACCGCCGC CTCTACCAGC AGATCGCCGA CAAGCTCAGC 
GCGATGATCG GGTCCGGCGA TTTTCCGCCG GGCAGCTATC TGCCGCCCGA GCGCGAACTG
GCCGAGCAGT TCGGCGTGTC GCGCACGTCG GTGCGCGAGG CGCTGATCGC GCTCGAAGTG
AGCGGGCTCG TCAGCGTGCG TGTCGGCGAC GGCGTAAAGG TGCGCCAACC CGAGGCGGCA
GCCGCGCCGC AAGCGCGGCA CGAGACGAAG GTTGCGCCGT TTTCGATCGT CGAGATCGAT
CCTGAACTCG GCATCGCGCT CGACCTCGAT ACCGAAATCC CGCCGTTCGC GCTGTTGCAG
GCGCGCCGGC TGATCGAGCC GGAAGCCGCA TCGCTCGCGG CGAAACACGG CTCGGACGAA
CAAATCGAAG GGATTCACGA CGCGTTCCTG CGCAACCAGG AAGACAACCG CAGCGGCTCG
CTCACGCATC CGGGCGACCG GCTGTTCCAT ATCCGTATCG CGGAAGCGAG CGACAACCCG
GCTTATGCGC TGATGATCAA GCAGTTGCTC GCGCACAAGT ACGACCTGAT GTTCCAGCGC
CTGCAGTCGC TGTACATGCC CAGCGACATG CCGCACCGGT CGGAGCTGGA ACACCGCGCG
ATCCTCGACG CGATCCGCGC ACGCGACCCC GAGGCCGCGC GCCGCGCGAT GGCCGAGCAT
CTCGACGAAG TCATCCGGAT CTTCGGACGC GCGCTCGACT GA
 
Protein sequence
MSIQPIQNRR LYQQIADKLS AMIGSGDFPP GSYLPPEREL AEQFGVSRTS VREALIALEV 
SGLVSVRVGD GVKVRQPEAA AAPQARHETK VAPFSIVEID PELGIALDLD TEIPPFALLQ
ARRLIEPEAA SLAAKHGSDE QIEGIHDAFL RNQEDNRSGS LTHPGDRLFH IRIAEASDNP
AYALMIKQLL AHKYDLMFQR LQSLYMPSDM PHRSELEHRA ILDAIRARDP EAARRAMAEH
LDEVIRIFGR ALD