| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4961 |
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| Symbol | |
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| ID | 6181414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2112297 |
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| End bp | 2113637 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684713 |
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| Product | amidase |
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| Protein accession | YP_001811623 |
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| Protein GI | 172063972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.439817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.52476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCG CGCTCGCGCT GGCGGCCGAG GTTCGCGCGG GGCGCGTGAG TGCAGTGTCG
CTCGTGCAAA CCGTGCTCGC CGATATCACC GCGCGCGACG GCACCATCCA TGCTTGCGCA
CAAACCTTCG GCGCGCGCGC ACAGCGCGAC GCACAGCGGA TTGACGGCCT CGTGCGCGAC
GGGCGTGACC CCGGCCCGTT GGCGGGCGTG CCGTTTCTCG TGAAGTGGAA TTTCGACGTA
ACGGGCTACA CGGCGGTCGC GGGATCGCCG GCGCGCGCCG CATTGCCGGC CGCCGCCACC
GATGCATCAG CGGTCGCCCG ACTGTGCTCG GCCGGCGCGG TGCCGGTCGG CGCAACGCAT
ATGGACGAAC TCGCGTGCGG CGCCACCGGC GTGAATCCGC ACTATGGCGC GGTGCGCCTG
CCGGCTGACC CGGCACGCAT GACGGGCGGT TCGTCGAGCG GCTCGGCTGC CGCCATCGCC
GCCGGATACG TACCGCTCGC GCTCGGCAGC GACACGAACG GCTCGATCCG CGCACCGGCG
GCGCTGTGCG GCGTGTGGGG GTTTCGCCCA AGCGACGGGC GGCTGTCGCG AGCCGGTTGC
CTGCCCTATG CCGCATCGCT CGACACGGTC GGCGGATTCG CGAACGATAT CGACGATCTG
GCGGCGCTGT ATGACACGCT ATGCGACGCG AATTCATTGC GCGCGCAACC GATTCGCGAT
CCGGCCGCCC CTCTTCGCGT CGCCGTGCTG ACGGGCGATT TCGACAGACT TGCCGATGCG
GATGCGCAAC GCGCCGTCCG GCGCGCGGCG CTCTGTCTGC GTGCGTGGGA ATCCGTGACG
ATCGACAGCG ACGAAGTCGC ACGCGTGCGT GACGCGGCGA CCGCGGTCTC GAATGTAGAG
CTGGCGCACA CCCATCGCGG GCTGCTCGAC GCGCCGGTGG CGCTCGTCTC CGAACGCCTG
CGCTCACGCA TCGCAATCGG CCTCGCAACC CCCGACGCCG CCTATCGGGA CGCGCTTGCC
TGCCGTGACG CCTGGCGCGC GCGCATCGAA GCGCTGTTCG CGCGCTACGA CGTGCTGCTC
GCGGCCGCGA CGCCCTGTGC CGCACCGCGC GTCACCGACG CGACCGTCGA TGTCGACGGC
GTCGCGCTCG AACCCGCGAA GACGCTCGGC CTGCTCACGC AGCCGATTTC GTTCGCGGGG
CTGCCGGTCG TCAGCGCGCC GTGCTTCATG TCAGGTGAAT TGCCGGTCGG GGTGCAGTTG
ATCGGTGCAC CGCAAGCCGA TGCGGTTTGC TTCGACGCCG CGCGGCAATT CGCTGTCGCC
TGGAGCGGCC TGCGCCGCTA A
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| Protein sequence | MRGALALAAE VRAGRVSAVS LVQTVLADIT ARDGTIHACA QTFGARAQRD AQRIDGLVRD
GRDPGPLAGV PFLVKWNFDV TGYTAVAGSP ARAALPAAAT DASAVARLCS AGAVPVGATH
MDELACGATG VNPHYGAVRL PADPARMTGG SSSGSAAAIA AGYVPLALGS DTNGSIRAPA
ALCGVWGFRP SDGRLSRAGC LPYAASLDTV GGFANDIDDL AALYDTLCDA NSLRAQPIRD
PAAPLRVAVL TGDFDRLADA DAQRAVRRAA LCLRAWESVT IDSDEVARVR DAATAVSNVE
LAHTHRGLLD APVALVSERL RSRIAIGLAT PDAAYRDALA CRDAWRARIE ALFARYDVLL
AAATPCAAPR VTDATVDVDG VALEPAKTLG LLTQPISFAG LPVVSAPCFM SGELPVGVQL
IGAPQADAVC FDAARQFAVA WSGLRR
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