| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4959 |
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| Symbol | |
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| ID | 6179825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2109415 |
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| End bp | 2110851 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684711 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_001811621 |
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| Protein GI | 172063970 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.555934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCG ACGTGATCCT GCGCCGCGGC GAACTGATCG ACGGTACGGG AGCCGCGCGC
TTCGAGGCCG ATCTCGGCGT GACCGGCGAG CGCATCGTCG CGATCGGCGA CCTGAGCGGC
GCAACCGCCG TGCACACGCT CGATGCGAAC GGCCTGGTCG TCGCGCCGGG CTTCATCGAC
AGCCACACGC ACGACGATGC GTTCGTGCTG ACCGACCCCG ACGTCGAGCC GAAAGTTGCG
CAAGGCGTGA CCACGGTGAT CGCCGGCAAT TGCGGGATCA GTCTCGCGCC GCTGCTCGCG
GAACGCGACG TGCCGCAACC GCTCGACCTG CTGGGCGCAT GGCAGTCGTT TCGCTTTCCG
TCCTTTCGCG CCTATCTCGA CGCGCTCGAC GCAACGCCCG CCGCCGTCAA CACGGCGGCC
CTGATCGGCC ACTCGACGCT GCGCGTGCGG CACATGGCCG ATCTCGGACG CGCAGCCGAC
GCGGCGGAGA TCGCGGCGAT GGCGGCCGAC GTGCGCGAGG CGATGACGGC CGGCGCATTC
GGCGTCTCGA CGGGCACCTT TTACCCGCCC GCGGCGGCCG CGACGACCGA CGAGCTGATC
GACGTGTGCG CACCGCTGCG CGAGACGGGC GGCGTGTTCG CGACGCATCT GCGCGACGAA
ACCGATGCGA TCATTGCGTC GCTCGACGAA GCGTTCACGA TCGGTCTTGC GCTCGACGTG
CGCGTCGTGC TGTCGCATCA CAAGGTGGCC GGCAAGGCGA ACCACGGCCG CTCGGTCGAA
ACGCTCGCGC ATATCGATGC GCAGCGCACA CGGCAACCGC TGTGCCTCGA CTGCCACCCG
TATCCCGCCA CGTCGACGAT GCTGCGCGCG GATCGCATCC GCCAGTCGTC CCGCGTGCTC
CTCGCATGGT CGAAGCCGCA TCCCGAGCTC GCGGGCCGTG AATTCGCCGA ACTGCTGCCA
CTGTTCGGCG ATTCCATCGA CGCCGCGATC GATGCGCTGC GCCCTGCTGG CGCGATCTAC
TTCGTGATGG ACGAAGCGGA CGTCGAGCGC ATCATGCGCC ACGAACTGAC GACGGTCGGC
TCAGACGGCC TGCCCAACGA CATGCGCCCG CACCCGCGGC TGTGGGGTAC GTTCCCGCGC
GTGCTCGGCG AATTCTCCCG CGAGCGCGGC CTGTTCCCGC TCGAAACCGC CGTGCGCAAG
ATGACAGGCC TCACTGCCGA ACAATTCGGA ATCGCGAAGC GCGGGCGCCT CTCGGTCGGT
CACTACGCCG ATTTGGTCGT GTTCGATCCG GCGCGCGTGA TCGACCGTGC GACGTTCGCT
CACCCGACGC TACGCCCTGA AGGCATCGAG CACGTGTTCG TCAACGGCCG AGCCGTGCTC
GAACACGGCC GGCACACCGG CACGCGCCCC GGCCGGGCGC TACGCCGCGC AAGCTAG
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| Protein sequence | MHFDVILRRG ELIDGTGAAR FEADLGVTGE RIVAIGDLSG ATAVHTLDAN GLVVAPGFID
SHTHDDAFVL TDPDVEPKVA QGVTTVIAGN CGISLAPLLA ERDVPQPLDL LGAWQSFRFP
SFRAYLDALD ATPAAVNTAA LIGHSTLRVR HMADLGRAAD AAEIAAMAAD VREAMTAGAF
GVSTGTFYPP AAAATTDELI DVCAPLRETG GVFATHLRDE TDAIIASLDE AFTIGLALDV
RVVLSHHKVA GKANHGRSVE TLAHIDAQRT RQPLCLDCHP YPATSTMLRA DRIRQSSRVL
LAWSKPHPEL AGREFAELLP LFGDSIDAAI DALRPAGAIY FVMDEADVER IMRHELTTVG
SDGLPNDMRP HPRLWGTFPR VLGEFSRERG LFPLETAVRK MTGLTAEQFG IAKRGRLSVG
HYADLVVFDP ARVIDRATFA HPTLRPEGIE HVFVNGRAVL EHGRHTGTRP GRALRRAS
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