| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4956 |
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| Symbol | |
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| ID | 6179478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2105966 |
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| End bp | 2107234 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684708 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001811618 |
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| Protein GI | 172063967 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.888162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT CCGCGCCCCC CATTTCGTCT TCACGCGTGC CGCGCCCGAC GCTGCAAAGC
GTGCTGCGTC GCGCGCATTT GCGCCTCGCG TTCGTCGCGG TTGCGATGGC CGCCGTGTCG
CTGATCGTCG TCGCCGTGAT CGCGTTGCGC GCGTATGCCG GCAACAACCT GAACCTGCTG
GCCCGCTCGC TCGGCTATAC GGTCGAGGCG GCGCTCGTGT TCGGCGACCG CGTCGCGGCA
AACGAGGCAA TTGCAACCAT TGCCAACGAC GAGGACGTCG CGCAGGTGGT CGTCACCAAT
GCCAGGGGAC AGTTGTTCGC CACCTGGAAG CTGCCCGCCG AAGGCCGGAT CGCCCGAATC
GAGCGCGGTG TCGCCGATCT CGCGCTGCCC GGGCCCGTGA CCATTCCGGT GATGCACGAC
GGCATCGTCG TCGGTCAGGT CATCGTGCGT GGCCGCGGGC ATCAGTTTTT CGGATTCCTG
CTCGGTGGCA TCGGCGGCAT TCTCGGCTGC CTGGTCGTCA GCGTGCTCGG CGCGTATGTC
AGCTCGAAGC GTCTACTGCG CAACATCGTT GCGCCGCTGC GCGCGCTCGC CGGCGTCGCG
CATGCCGTGC GGCGCGAGCG TGCGTTCGGG CGGCGCGTCG AGCCCGCGGC GATCGCCGAG
CTCAACCAGC TCGGCGACGA CTTCAACGCG CTGCTCGACG AATTCGAAGA CTGGCAGAAC
ACGTTGCGCG ACGAAAACGC ATCGCTCGAA CACAAGGCGA CGCACGATGC GCTCACCGGG
CTGCCCAACC GTGCGCAGTT CGAGTCGCGT CTGTCGGTGG CGCTTTGCGA TGCCGTGGTG
ACCGGGCAGC GGGTCGCCAT CCTGTATCTC GACTGCGACC GCTTCAAGGA GATCAACGAC
TGCCTGGGCC ACGATGCCGG CGATGCGGTG CTGGTCGGTG TCGCGGGGCG GCTGCGCACG
CAGGTGCGCG AGACCGATCT GGTCGCGCGC CTGGGCGGCG ATGAATTTGC GGTGATGCTG
GGCACTGTGC GCGAAGTGGA AAGCGTGTGC CGGATCGCCG ACGAGATTTT GTCCGGCATG
GTGCCGTCGA TCGAGCTGCC CGACGGACGC ATGGTGGCCA CCATGATGAG TGCCGGCGTG
GCGCTGTATC CCGATCACGC GTCGGACGCG AACGGCTTGC TGCGGGCGGC GGATGCCGCG
ATGTACCGCG CCAAGCGCAC GCGGCCGGGG ACGTGGCAGT GGGCGGAAGG CGTTGCCGGG
CGGGTTTGA
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| Protein sequence | MTRSAPPISS SRVPRPTLQS VLRRAHLRLA FVAVAMAAVS LIVVAVIALR AYAGNNLNLL
ARSLGYTVEA ALVFGDRVAA NEAIATIAND EDVAQVVVTN ARGQLFATWK LPAEGRIARI
ERGVADLALP GPVTIPVMHD GIVVGQVIVR GRGHQFFGFL LGGIGGILGC LVVSVLGAYV
SSKRLLRNIV APLRALAGVA HAVRRERAFG RRVEPAAIAE LNQLGDDFNA LLDEFEDWQN
TLRDENASLE HKATHDALTG LPNRAQFESR LSVALCDAVV TGQRVAILYL DCDRFKEIND
CLGHDAGDAV LVGVAGRLRT QVRETDLVAR LGGDEFAVML GTVREVESVC RIADEILSGM
VPSIELPDGR MVATMMSAGV ALYPDHASDA NGLLRAADAA MYRAKRTRPG TWQWAEGVAG
RV
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