| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4945 |
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| Symbol | livM |
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| ID | 6179903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2090611 |
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| End bp | 2091882 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684698 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_001811608 |
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| Protein GI | 172063957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.487918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG TCATTTCCGT TCGCCGTCCG GCCGCCGACG CTTCGGTCAG CCAGGCGCTG
AAGAATGCCG TGGCCGCCGC GTTCCTGACG GCGATCCTCA CGATTCCGGT GCTCGGGCTG
CAGTTGAAGC TCGACGGCTA TCAGGTGGTG CTGACGCCGC ACTGGCGCCC GGTGTGGATC
GCGGTCGCGG CCGTGTTCCT GTTCCAGCTG TTCAAGCCGT GGCTCGTGCG CGCGAAATCG
GCGGTGAAGC TGCCGGCGCT GCCCGCGATG GGCGCGCAGC AGCAGCGCGT GGTCATCTGG
GTGCTGCTCG CGGTCGGGCT CGTGTGGCCG TTCTTCGGCT CACGCGGCGC GGTGGACGTC
GCGACGCTCG CGCTGATCTA CGTGATCCTC GGCCTCGGGC TGAACATCGT GGTCGGTTTC
GCGGGCCTGC TGGACCTCGG CTATGTCGGG TTCTACGCGG TCGGCGGCTA TACGTACGCG
ATGCTGAACC AGTATTTCGG GCTGTCGTTC TGGGAGTGCC TGCCGATCGC GGCGATCGCG
GCGGCGACGT TCGGCTTCCT GCTCGGCTTC CCGGTGCTGC GGCTGCGCGG CGACTATCTC
GCGATCGTCA CGCTCGGCTT CGGCGAAATC ATCCGCCTGC TCGCGAACAA CCTGACGAGC
CTCACGGGCG GCCCGGACGG TATCTCGAGC ATTCCGAAGC CGACGGTGTT CGGCTTCGAG
ATGGCGCGCT CGGCGAGCGT CGAAGGCGCG AAGACCTTCC ACGAGCTGAT TGGGCTGGAA
TACAGCGGCG AGCACATGGT GATCTTCCTG TACCTGATCG CGCTGGTGCT GGTCGGCTTC
ACGCTGTTCG TGACGAGCCG CCTGATCCGC ATGCCGATGG GCCGCGCGTG GGAAGCGCTG
CGCGACGACG AGATCGCGTG CCGTTCGCTG GGCCTGAACC CGACGCGCAT CAAGCTGTCG
GCGTTCACGC TCGGCGCGGC GTTCGCGGGC ATCGGCGGCG CGTTCTTCGC GGCGCGTCAG
GGCCTCGTGA ATCCTGAGTC GTTCACCTTC ATCGAATCGG CGCTGATCCT CGCGATCGTC
GTGCTCGGCG GGATGGGCTC GCAGCTCGGC GTGATTCTCG CGGCAATCCT GCTGACCGTG
CTGCCGGAAG TCGCGCGCGG GTTCGCCGAA TACCGGATGC TGATCTTCGG TCTGGTGATG
GTGTTGATGA TGATGTGGCG TCCGCAGGGC CTGCTGCCCG CGAGCCGTCC CCACGTGGAG
CTGCCGCAAT GA
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| Protein sequence | MSQVISVRRP AADASVSQAL KNAVAAAFLT AILTIPVLGL QLKLDGYQVV LTPHWRPVWI
AVAAVFLFQL FKPWLVRAKS AVKLPALPAM GAQQQRVVIW VLLAVGLVWP FFGSRGAVDV
ATLALIYVIL GLGLNIVVGF AGLLDLGYVG FYAVGGYTYA MLNQYFGLSF WECLPIAAIA
AATFGFLLGF PVLRLRGDYL AIVTLGFGEI IRLLANNLTS LTGGPDGISS IPKPTVFGFE
MARSASVEGA KTFHELIGLE YSGEHMVIFL YLIALVLVGF TLFVTSRLIR MPMGRAWEAL
RDDEIACRSL GLNPTRIKLS AFTLGAAFAG IGGAFFAARQ GLVNPESFTF IESALILAIV
VLGGMGSQLG VILAAILLTV LPEVARGFAE YRMLIFGLVM VLMMMWRPQG LLPASRPHVE
LPQ
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