Gene BamMC406_4915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4915 
Symbol 
ID6181457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2065063 
End bp2066364 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID641684667 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_001811578 
Protein GI172063927 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCA TCAAGCGGTA TTTCGGCTTC GCTGAAGCCG GCACCGACTT CCGCACCGAA 
ATACTCGCGG GCGTCACCAC GTTCCTGACG ATGGCTTACA TCATCTTCGT CAACCCGGCG
ATCCTCGGCG ACGCCGGCAT GCCGAAGGAA TCCGTGTTCG TCGCGACCTG CCTCGTCGCG
GCGCTGGCGT CGCTCATCAT GGGGCTGTAC GCGAACTACC CGATCGCCTG CGCGCCGGGC
ATGGGCCTGA ACGCGTATTT CGCATACACG GTCGTCAAGG GGATGGGCTT CACGTGGCAG
GCCGCGCTCG GCGCGGTGTT CATCTCCGGC TGCCTGTTCC TGCTCGTCAC GCTGTTCCGC
GTGCGCGAGG CGATCGTCAA CGGCATTCCA AAATCGCTGC GCATCTCGAT CACCGCCGGC
ATCGGCCTGT TCCTCGGCAT CATCTCGCTG AAGACCTCCG GCGTGATCGT CGGCAACCCG
GCCACGCTCG TCACGCTCGG CGACCTGCAC AAGCACGACA CGATCCTCGC GATCGTCGGC
TTCTTCACGA TCGTCACGCT CGACCATCTG CGCGTACGCG GCGCGATCCT GATCGGCATC
ATCGGCGTGA CGATCCTGTC GTTCTTCTTC GGCGGCAACC AGTTCCACGG CGTGTTCTCC
GCACCGCCGT CGATCGACGC GACGCTGTTC AAGCTCGACA TCGGCGCCGC ACTGTCGACC
GGCATCATCA ACGTGATCCT CGTGTTCTTC CTCGTCGAGC TGTTCGACGC GACCGGCACG
CTGATGGGCG TCGCGAACCG CGCGGGCCTG CTCGTCGAAG GCAAGATGAA CCGCCTGAAC
AAGGCGCTGC TCGCCGACAG CACCGCGATC GTCGCGGGCT CGATACTCGG CACATCGTCG
ACCACCGCGT ATATCGAAAG CGCGTCGGGC GTGCAGGCCG GCGGCCGCAC GGGCGTGACG
GCGATCACCG TCGCGGTGCT GTTCCTCGCG TGCCTGTTCA TCGCGCCGCT CGCCGGCGTC
GTGCCGGCCT ACGCGACCGC GCCTGCGTTG CTGTACGTGT CGTGCCTGAT GCTGCGCGAG
ATGGTGGACG TGCCGTGGGA CGATGCGACC GAAGCCGTGC CGGCCGCCCT GACCGCGCTG
TTGATGCCGT TCACGTACTC GATCGCGAAT GGCGTCGCGT TCGGCTTCAT CTCGTATGGC
GGCCTGAAGC TGCTGACGGG CCAGGCCCGC ACGGTCAAGC CGGTCGTGTG GATCATCGCG
GCCGTGTTCC TGTTCCGCTT CTTCTATCTC GGCAGCGAGT GA
 
Protein sequence
MESIKRYFGF AEAGTDFRTE ILAGVTTFLT MAYIIFVNPA ILGDAGMPKE SVFVATCLVA 
ALASLIMGLY ANYPIACAPG MGLNAYFAYT VVKGMGFTWQ AALGAVFISG CLFLLVTLFR
VREAIVNGIP KSLRISITAG IGLFLGIISL KTSGVIVGNP ATLVTLGDLH KHDTILAIVG
FFTIVTLDHL RVRGAILIGI IGVTILSFFF GGNQFHGVFS APPSIDATLF KLDIGAALST
GIINVILVFF LVELFDATGT LMGVANRAGL LVEGKMNRLN KALLADSTAI VAGSILGTSS
TTAYIESASG VQAGGRTGVT AITVAVLFLA CLFIAPLAGV VPAYATAPAL LYVSCLMLRE
MVDVPWDDAT EAVPAALTAL LMPFTYSIAN GVAFGFISYG GLKLLTGQAR TVKPVVWIIA
AVFLFRFFYL GSE