Gene BamMC406_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4908 
Symbol 
ID6180936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2057345 
End bp2058622 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content64% 
IMG OID641684660 
Productphosphoserine phosphatase 
Protein accessionYP_001811571 
Protein GI172063920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.240321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.433606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC GCCGGTTCAT GAACACCCTT GCCGCGGCGA CCGCCGCGAC GCCGCTCATG 
CTCAAGGCCG GCATCGCCGG CGCGAAGAGC GCAATCGCGC CGGACACGCT GGATCCGGGC
CGCTGGTCGC CGTTCAACGC CGCGCGCCTG CAGGCGGTGC TCGACCAGCA TGGCGTCGCG
AGCGCGCGCT ACGATGGAAA GCGCCGCCCG TATGCGGTGT TCGACTGGGA CAACACGTGC
ATCATGAACG ACTGCGAAGA GGCGTTGCTG ATGTACCAGA TCAACCATCT GCAGTACAAG
CTGACGCCGG ACGAGTTCGT CGCCGTGATG TGGAAGGACG TGCCGAAGGG CACGTTCATG
AAGGACTACA CGACCGTCGA CGGCAAGCCG GTGACGATGG AGGACCTCGC CGCCGACGTC
GAGTCCGACT ACCGCTGGCT CCATGCGAAC TACAAGGGCT TCGGCGGCGG CAAGAGCCTC
GACGAGATTC GCGAGACCGA CCAGTTCAAG GATTTTCGCG CGAAGCTGTA CTTCATGTAC
GACGCGATCT GCGACACGCA TCCGCTCGAA GTCGGCTACA AGTGGATCAT CTACTTCTAC
AAGAACATGA CGACCGCCGA GCTGCAGGCG ATGGCGGAAG CGTCGAACAA CTACGGTATC
GGCGACGCGC TGCGCAAGGT TCGCTACGAA AGCCCGAAGG CGCTGCCGGG CAAGGCCGGC
GTGGTGGCCG ATACCCATTT CCACGGCATC CGCATTCACG AGGAAATCCG CGCGGTGATG
CATACGCTGC GTGCGAACGG CATCGACGTG TACGTGAGCA CCGCGTCGCT CGACGACGTC
GTGCGCGTGT TCGCCGGCAA TCCGAACTAT GGCTACGGCG TGGCGCCCGA GAACGTGATC
GGCCTGCGTC TCGACATGCA GGACGGCAGG TACACGAGCA CCTATCCGGC CGGCTGGCAT
TTCAACTGGG GGCCCGGCAA GACGGTGGGC ATCCGCAACG TCCTCGCGTC GAAGAAGGGT
TACGGCCCGC TGCTGGTGTT CGGCGACAGT GACGGCGACG CGTGGATGCT GCGCGATTTC
AAGGACACCG CGGCCGGCGT GATCGTCAAC CGGATGAAGA AGGGCGAGAT TGGCGCGGAC
AGCACGCTCG CGGCCGAACA GATCGGCAAG CCGAACGCGC GCTTCCTGCT GCAGGGTCGC
GACGAGCACA CGGGCCTGAT GATCCCGGAC GAGAAGTCGC TCAAGTACGG CAAGACCGAG
CGCAAGCTGC TGGCCTGA
 
Protein sequence
MQRRRFMNTL AAATAATPLM LKAGIAGAKS AIAPDTLDPG RWSPFNAARL QAVLDQHGVA 
SARYDGKRRP YAVFDWDNTC IMNDCEEALL MYQINHLQYK LTPDEFVAVM WKDVPKGTFM
KDYTTVDGKP VTMEDLAADV ESDYRWLHAN YKGFGGGKSL DEIRETDQFK DFRAKLYFMY
DAICDTHPLE VGYKWIIYFY KNMTTAELQA MAEASNNYGI GDALRKVRYE SPKALPGKAG
VVADTHFHGI RIHEEIRAVM HTLRANGIDV YVSTASLDDV VRVFAGNPNY GYGVAPENVI
GLRLDMQDGR YTSTYPAGWH FNWGPGKTVG IRNVLASKKG YGPLLVFGDS DGDAWMLRDF
KDTAAGVIVN RMKKGEIGAD STLAAEQIGK PNARFLLQGR DEHTGLMIPD EKSLKYGKTE
RKLLA