| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4903 |
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| Symbol | |
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| ID | 6180667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2050588 |
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| End bp | 2052294 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684655 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001811566 |
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| Protein GI | 172063915 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.266774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0797319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAC AGGCATTCCT GGACGCACGC GACTTTCTGC TGCGCCATCG CACCGACTAC
GACACCGCTT ACCGCGATTT CGAATGGCCG GTGCTCGATG CGTTCAACTG GGCGCTCGAC
TACTTCGACC CGATGGCGCG CGGCAACGAC CAGCCCGCGC TGTGGATCGT CGACGCGGCA
ACCGGGACGG GCGACCCGTA TTCGTTCGCG CAGATGTCCG AGCGCTCGTC GCGGATCGCG
AACTGGCTGC GCGGCATCGG CGTCGTGCGC GGCGACCGGA TCCTGCTGAT GCTGCCGAAC
CGTGTCGAGC TGTGGGACGC GATGCTCGCC GCGATGAAGC TCGGCGCGAT CGTGCTGCCC
GCCACTACCC AGCTGTCGGC CGACGACGTG CGCGATCGCG TGCAGATCGG CGGCGCCACA
TACGCGATCG TCGACGAGAA CGAAACCGCG AAGTTCGAAC AGGCCGATCT CGGCCTGAGG
CGCAAGATCG TCGCCGGCGC GCCACGCGAC GGCTGGCTTG CGATGAACGA CGGCTACGCG
GCGAGCGACG TATTCACCCC CGACGCCGTC ACGCAGTCGA ACGAAACGAT GCTGCTGTAC
TTCACGTCGG GCACGACGTC GAAGCCGAAG CTCGTCGAGC ATACGCACCG CACCTATCCG
GTCGGGCACC TGTCGACGAT GTACTGGGTC GGCCTGCAGC CCGGCGACAT CCACTGGAAC
ATCAGCTCGC CGGGCTGGGC GAAGCATGCG TGGAGCTGCT TCTTCGCGCC GTGGAATGCG
CAGGCGTGCG TGTTCGCGTT CAACTACGCG CGCTTCGAGC CGAAGGTCGT GCTCGATGCG
CTCGTCAAAT ACCGGGTGAC CACGCTGTGC GCGCCGCCGA CCGTGTGGCG GATGCTCGTG
CAGCAGCCGC TCGCGTCGTT CGACGTGAAG CTGCGCGAGA TCGTCGGCGC GGGCGAGCCG
CTCAATCCCG AGATCATCGA GCGCGTGAAG AAGGCGTGGG GCATCACGAT TCGCGACGGC
TACGGCCAGA CCGAGACGAC CTGCCTGATC GGCAACACGC CGGGCCAGCC GGTCGTCGCC
GGCTCGATGG GGCGGCCGCT GCCGGGCTAC CGGATCGCGC TGCTCGACCC GGACGGCGCG
CCCGTCAGCG AAGGCGAGGT CGCGCTGCCG ATCGGCGCGG GCGCATCGCG CCCGGTCGGG
CTGATGAACG GCTACGCGAA CAATCCCGAC GCGACGGCCC ATGCGATGCG CGACGGCCAT
TACCGCACGT CGGACATCGC GATGCGCGGC GACGACGGCT ACTACGTGTA CATCGGCCGC
GCGGACGACG TGTTCAAGTC GTCCGACTAC CGGCTGAGCC CGTTCGAGCT GGAAAGCGTG
CTGATCGAGC ATCCGGCGAT CGCGGAGGCG GCCGTCGTGC CGAGCCCGGA CCCGCTGCGG
CTGTCGGTGC CGAAGACCTA CATCACGCTG CGCCAGGGCT ACGAGGAAAG CCCGGCGCTC
GCGCTGGAGA TCTTCCGCTT CTCGCGCGAG AAGCTCGCGC CGTACAAGCG CATCCGCCGC
CTGCAGTTCG CCGAGCTGCC GAAGACCATC TCGGGGAAGA TCCGCCGCGT CGAGCTGCGC
CGCCGCGAGA TCGAGCGCGG CGACGATGCG ACGACGCGCA TGCCCGGTGA ATACTGGGAA
GAAGATTTCG CCGCCGAACT GAAATGA
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| Protein sequence | MTVQAFLDAR DFLLRHRTDY DTAYRDFEWP VLDAFNWALD YFDPMARGND QPALWIVDAA
TGTGDPYSFA QMSERSSRIA NWLRGIGVVR GDRILLMLPN RVELWDAMLA AMKLGAIVLP
ATTQLSADDV RDRVQIGGAT YAIVDENETA KFEQADLGLR RKIVAGAPRD GWLAMNDGYA
ASDVFTPDAV TQSNETMLLY FTSGTTSKPK LVEHTHRTYP VGHLSTMYWV GLQPGDIHWN
ISSPGWAKHA WSCFFAPWNA QACVFAFNYA RFEPKVVLDA LVKYRVTTLC APPTVWRMLV
QQPLASFDVK LREIVGAGEP LNPEIIERVK KAWGITIRDG YGQTETTCLI GNTPGQPVVA
GSMGRPLPGY RIALLDPDGA PVSEGEVALP IGAGASRPVG LMNGYANNPD ATAHAMRDGH
YRTSDIAMRG DDGYYVYIGR ADDVFKSSDY RLSPFELESV LIEHPAIAEA AVVPSPDPLR
LSVPKTYITL RQGYEESPAL ALEIFRFSRE KLAPYKRIRR LQFAELPKTI SGKIRRVELR
RREIERGDDA TTRMPGEYWE EDFAAELK
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