| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4901 |
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| Symbol | |
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| ID | 6180247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2048030 |
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| End bp | 2048932 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684653 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001811564 |
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| Protein GI | 172063913 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0315002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.105454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG GTTTTATCGG ACTGGGCCAC ATGGGTGCGC CGATGGCGCT GAACCTGCTC
AAGGCTGGCC ATGAAGTGCA TGCGTTCGAC CTGAGCGCCG ATGCATTGCG CGCGCTGCAG
GACGCCGGCG CGCAGGCGGC CGCCTCGCCG CGCGATGCGG CCTCGGGCGC GACGTTCGTG
ATCACGATGC TGCCGGCCGC GCCGCACGTG CGCTCCGTGC TCGCCGGTGA AAACGGCGTG
CTGGCCGGCC TCGACGCCGG CGCGACCGTG ATCGATTCGA GCACGATCGA CCCGGCGAGC
GCGCAGGCGT TCGGCGCGCT CGTGCGCGAG CACGGCGGCG CGTTCGTCGA TGCGCCGGTG
TCGGGCGGCA CCGGCGGCGC GGCGGCCGGC ACGCTGACCT TCATGGTCGG CGGCAGCGAC
GCCGATTTCG AGCGCGTGAA GCCCGTGCTC GCCGGCATGG GCAAGAACAT CGTCCACTGC
GGCCCAACCG GGATGGGGCA GGTCGCGAAG GTCTGCAACA ACCTCGTGCT CGGCATCTCG
ATGGCGGCCG TATCGGAGGC GATGTCGCTC GGCGTCGCGC TCGGCATCGA CCCGAAGGTG
CTGGCCGGCA TCGTCAACAC GTCGACGGGC CGCTGCTGGA GCTCGGACAC CTACAACCCG
TATCCGGGCG TGATCGCCAC CGCGCCGTCG TCGCGCGGCT ACAGCGGCGG CTTCGGCACC
GACCTGATGC TGAAGGATCT CGGCCTCGCG AACGACGCCG CGAAGCAGGC GCGCCAGCCC
GTCTATCTCG GCGCGCTCGC GCAGCAGCTG TACCAGGCGA TGAGCAGCCG CGGCGACGGG
CAACTCGATT TCTCGGCGGT GATCCGCCTG TACCAACCGG CCACGAAGAA GGACGCCTCA
TGA
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| Protein sequence | MKIGFIGLGH MGAPMALNLL KAGHEVHAFD LSADALRALQ DAGAQAAASP RDAASGATFV
ITMLPAAPHV RSVLAGENGV LAGLDAGATV IDSSTIDPAS AQAFGALVRE HGGAFVDAPV
SGGTGGAAAG TLTFMVGGSD ADFERVKPVL AGMGKNIVHC GPTGMGQVAK VCNNLVLGIS
MAAVSEAMSL GVALGIDPKV LAGIVNTSTG RCWSSDTYNP YPGVIATAPS SRGYSGGFGT
DLMLKDLGLA NDAAKQARQP VYLGALAQQL YQAMSSRGDG QLDFSAVIRL YQPATKKDAS
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