| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4899 |
|---|
| Symbol | |
|---|
| ID | 6180180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2046106 |
|---|
| End bp | 2047245 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641684651 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001811562 |
|---|
| Protein GI | 172063911 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.298082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0486568 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CGGTCACGAC TCACGATAGC GTCGCGCAAC CCGCGCCGGA GGTGCTGTTC
CGCGTGGTGA ATCGCGTGGC GCTGATCACG CTGAACCGGC CGGCCGCGCT CAATGCGTTG
TCCTATCCAA TGATCGGCGA GCTCGCCGCG CTCCTCGAGC GTTGCCGCAC CGACGACCAG
ATCGTCGCGG TCGTACTGCG CGGCGCGGGC GAGAAAGGCT TCTGCGCGGG CGGCGACGTG
CGTGCGCTGT ACCGGATGGT CGCGCAGCGC GAGACCTGGC TGCCGTTCTT CGTCGACGAA
TACCGGCTCG ACCATGCGAT CCACACGTTT CCGAAACCGG TGGTCGCGCT GATGGACGGC
GTGACGATGG GCGGCGGGAT GGGGCTTGCG CAAGGCGCGG CGCTGCGTGT CGCGACCGAG
CGCAGCAAGA TCGCGATGCC GGAGACGCGC ATCGGTCTCG TGCCCGACGT CGGCGCGACG
CATTTCCTGT CGCGCATGCC GGTCGAGCTC GAACTGTACG TGGGGCTGAC GGGCGCGATG
CTGTCGGGCG CCGACGCGCT GAGCGCGAAG CTCGCGGACC TGTGCGTGCC GTCGTCGTGG
CTCGATACGT TCGAGACGCG CATCGAGAGC GTCAAGTGGG ACGGCGACGT GCTGCCGGCG
CTGCGCAAGG TGTTCGAGCC GCCGTGCAAC GTCGTGCCGC ATGCGGTGCT CGACACGCAG
ATGGCGTGGA TCGTCCGGCA CTTCGACAAG CGCTCGACCG TCGAGCGGAT CGTCGCGACG
CTGAAGCAGG ATCTCGCGCG CGAAGAGTTG TCGCGTGAGC ATCGTCAATG GCTGCAGGCG
ACGCTCGACG CGCTCGCCGG CCATTCGCCG ACGATGCTGT GCGTGACGCG CGAAGCGCTG
CTGCGCGGGC GCCAGATGAC GCTGGCCGAG TCGTTCCGGA TGGAGCTCGG CATCGTGGCG
CGCGCGATCG AGGAGGGCGA CTTCTGCGAA GGCGTGCGCG CGCATCTCGT CGACAAGGAT
CGCAAGCCGC GCTGGGCGCC GGCGTCGCTC GTCGAGCTGC GCGCCGAGCG CGTGCGGCAT
TTCCTGACCT CGCCGTGGAA GCTGTTCGCG CATCCGCTCG CCGATCTCGG CGCGGCGTGA
|
|---|
| Protein sequence | MSTPVTTHDS VAQPAPEVLF RVVNRVALIT LNRPAALNAL SYPMIGELAA LLERCRTDDQ
IVAVVLRGAG EKGFCAGGDV RALYRMVAQR ETWLPFFVDE YRLDHAIHTF PKPVVALMDG
VTMGGGMGLA QGAALRVATE RSKIAMPETR IGLVPDVGAT HFLSRMPVEL ELYVGLTGAM
LSGADALSAK LADLCVPSSW LDTFETRIES VKWDGDVLPA LRKVFEPPCN VVPHAVLDTQ
MAWIVRHFDK RSTVERIVAT LKQDLAREEL SREHRQWLQA TLDALAGHSP TMLCVTREAL
LRGRQMTLAE SFRMELGIVA RAIEEGDFCE GVRAHLVDKD RKPRWAPASL VELRAERVRH
FLTSPWKLFA HPLADLGAA
|
|---|
| |