| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4897 |
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| Symbol | |
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| ID | 6179218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2043413 |
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| End bp | 2044951 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684650 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001811561 |
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| Protein GI | 172063910 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.672511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0228989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAT CCGACACCCG CAGGAATGCG GTCGCGCTCG CGGCCGTCTG TCTCACGTCG
TTGATGTTCG GCCTCGAGAT CTCGAGCGTG CCGGTGATCC TGCCGACGCT CGAACATGTG
CTGCACGGCG ACTTCAACGG CATGCAGTGG ATCATGAATG CGTACACGAT CGCGTGTACG
ACGGTGCTGA TGGCGGCCGG CACGCTCGCC GACCGCTTCG GCCGCAAGCG CGTGTACGTG
ATCGGCACCG TGCTGTTTGG CGCGACGTCG TTGCTGTGCG GGCTCGCGCC GAACGTGCCG
GTGCTGGTCG CGGGCCGGCT GCTGCAGGGC GCGAGTGGCG GCGCGATGCT GATCTGCCAG
ATCGCGGTGC TGTCGCACCA GTTCCGCGAA GGGCGCGAGC GCGGCCGCGC GTTCGGGATC
TGGGGAATCG TGTTCGGGAT CGGTCTCGGC TTCGGGCCGA TCGTCGGCGG CGCGATCGTC
GCGCTGGCGA GCTGGCCGTG GGTGTTTCTC GTCCACGCGC CGCTCGCGGC CGTCGCGCTC
GTGCTGATCG GCGGCGCGGT GCGGGAGTCG CGCGATCCGC ATGCGGGCAC GCTCGACGTC
GCGGGCATCG TCACGCTGTC GCTCGCCGTG CTCGGCCTCG CGTTCTATAT CACCCAAAGC
GCGGAGCTCG GGCTCACTAG CGCGGCCGGC GTCGGCGTGC TTGGCGCGAC CGTGCTTGCG
CTGGCGGGCT TCGTCGTCGC GGAGCGCGTG AGCGCGCGGC CGATGTTCGA CTTCTCCGTG
TTCCGGATTC GCGCGTTCAC CGGCGCGATC TTCGGCTCGA TGGGGATGAA CTTCAGTTTC
TGGCCGTTCA TGATCTACCT GCCGATCTGG TTCCAGGTCG CGCTGGGATA CGACAGCGTG
ACGGCCGGCC TCGCGCTGCT CGCGTACACG CTGCCGACGC TGGTCGCGCC GCCGTTCGGC
GAGCGGCTCG CGCTGCGCTA CGGGCCCGGT GTCGTCATTC CGGGCGGCCT GTTCACGATC
TCGGCTGGTT TCGCGCTGAT GCGGATCGGC AGCGGCGTCG ACCACGCGAG CTGGCTTACG
ATGCTGCCGG GCTGCGTGAT CGCCGGCATC GGGCTCGGGC TGACCAACAC GCCGGTCACG
AACACGACGA CGGGCTCGGT GCCGGGTTCG CGGGCCGGGA TGGCGTCCGG CATCGACATG
AGTGCGCGGA TGATCTCGCT CGCGCTGAAT ATCGCGGCGA TGGGCTTCGT GCTGGTCGCG
GGGATTGTCG CGAGCCTGAA GGCGGGGGTG GCGGAGGCGG TCGATGCGGG GGCGTTGCGC
GCGCTGGCGC AGCAGATCGC GTCGGGCCGC ACCGACGGGT TGCAGACGAT AGCGCCGGCG
CTCGCGCAGG CCGACCCGAC CGGCACCGCG CTGCACGCGG CGCTCGTGCA CGGGTTCGGC
TGGGTGATGG TGTACGGCGC GGCCGGCGTG ACCGTGCTCG CGACCGCGAG CGCGGTGGCG
TTCGCGCCGG TGGGGCGGAG GGGGGCGGTG TGTGAATGA
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| Protein sequence | MTLSDTRRNA VALAAVCLTS LMFGLEISSV PVILPTLEHV LHGDFNGMQW IMNAYTIACT
TVLMAAGTLA DRFGRKRVYV IGTVLFGATS LLCGLAPNVP VLVAGRLLQG ASGGAMLICQ
IAVLSHQFRE GRERGRAFGI WGIVFGIGLG FGPIVGGAIV ALASWPWVFL VHAPLAAVAL
VLIGGAVRES RDPHAGTLDV AGIVTLSLAV LGLAFYITQS AELGLTSAAG VGVLGATVLA
LAGFVVAERV SARPMFDFSV FRIRAFTGAI FGSMGMNFSF WPFMIYLPIW FQVALGYDSV
TAGLALLAYT LPTLVAPPFG ERLALRYGPG VVIPGGLFTI SAGFALMRIG SGVDHASWLT
MLPGCVIAGI GLGLTNTPVT NTTTGSVPGS RAGMASGIDM SARMISLALN IAAMGFVLVA
GIVASLKAGV AEAVDAGALR ALAQQIASGR TDGLQTIAPA LAQADPTGTA LHAALVHGFG
WVMVYGAAGV TVLATASAVA FAPVGRRGAV CE
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