Gene BamMC406_4895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4895 
Symbol 
ID6179216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2041593 
End bp2042321 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID641684648 
Productmethyltransferase type 11 
Protein accessionYP_001811559 
Protein GI172063908 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00265389 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCAGA ACATCTATGA CGATCCCGCC TTCTTCGAAG GTTACAGCCG CCTGAACCGC 
TCGGTGCACG GGCTCGCCGG TGCGCCCGAA TGGCCCGCCT TGCGCGCGCT GCTGCCGCCG
CTGCGCGGCG CCAACGTGCT CGACCTCGGC TGCGGCTATG GATGGTTCAG CCGCTGGGCG
GCCGAACAGG GCGCGGCGAG CGTGCTCGGT ATCGACGTGT CCGAACGCAT GCTCGAACGC
GCGGTGTCGA CGGCCGCGCA CCCGGCGATC ACGTACCGCC GCGGCGACCT CGAAACGCTC
GCGCTGCCCG ATGCCGCGTT CGATCTCGCG TACAGCTCGC TCGCGTTCCA CTACATCGCA
CATCTCGACA CGCTGCTGCG CACGATCCAC CGCGCGCTCG TGCCGGGCGG GCGGCTCGTG
TTCTCGATCG AGCATCCGAT CTACACGGCG CCGCGCCGGC CCGGCTTCAT CGTCGATGCG
CAGGGCAAGC GCTCGTGGCC GCTCGATGGT TATCAGCGCG AAGGTGAACG CGTGACCGAC
TGGCTCGCGC CGGGCGTCGT CAAGCAGCAT CGCACGCTCG GCACGCTCGT GAACCTGCTG
ATCGGCAGCG GCTTCACGCT CACGCACCTG AACGAATGGG GGCCGACGCC GGAACAGGTC
GCTGCGATAC CCGCGCTCGA CGAGGAACGC GACCGGCCGA TGATGGCGAT CGTGGCCGCG
CAGCGGTAG
 
Protein sequence
MTQNIYDDPA FFEGYSRLNR SVHGLAGAPE WPALRALLPP LRGANVLDLG CGYGWFSRWA 
AEQGAASVLG IDVSERMLER AVSTAAHPAI TYRRGDLETL ALPDAAFDLA YSSLAFHYIA
HLDTLLRTIH RALVPGGRLV FSIEHPIYTA PRRPGFIVDA QGKRSWPLDG YQREGERVTD
WLAPGVVKQH RTLGTLVNLL IGSGFTLTHL NEWGPTPEQV AAIPALDEER DRPMMAIVAA
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