Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4889 |
Symbol | |
ID | 6179120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2036170 |
End bp | 2036805 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684642 |
Product | isochorismatase hydrolase |
Protein accession | YP_001811553 |
Protein GI | 172063902 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000690458 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACCGG AACACGCTTC AGATCGCGCA GCCACTGACC ACGCAGGCAC GGACACCCAC ACGCACGCGC CGATTCCACC GATCGTGCCG GCGCAAACTG CGCTGGTCGT CATGCACTAC CAGACCGACA TCCTCGGGCT TTTTCCGTCG GTCGCGCCTA CCCTGCTCGC CAACACGCGC AAGCTGTGCG ACGCGGCGCG GGCCGGCGGC GTCCACGTCT GCTTCGCCAA TCTCCGCTTC AGTCCCGGCT ATCCGGAAGT CAGTCCGCGC AACAAGAATG GCCAGGGGAT CAAGCAGCTC GGCCTGTTCG TCGACGACGG CCCATGCCCG GAGCTCGGCC GGCTGGACAG CGAGCCGCTG ATCGCCGCGC ATCGTGCGAG CGTGTTCTTC GGCACCGACC TGCAGGCGCG ACTCGTCGCG CAGGGTATCG ATACGCTGAT CCTGGTCGGG ATTGCGTCGA CCGGCGTCGT GCTGTCGTCG GTTGCGCACG CAAGCGATGC GGATTTCCGG CTGTATACGG TGAAGGACTG CTGCTACGAC CCGGATCAGG TCGTGCACGA GCATCTGTTC GCGACGGCGT TCGACACGCG CACGACGGTG CTGTCGCTCG ACGATGCGTT GCACTTGCTC GCGTAG
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Protein sequence | MQPEHASDRA ATDHAGTDTH THAPIPPIVP AQTALVVMHY QTDILGLFPS VAPTLLANTR KLCDAARAGG VHVCFANLRF SPGYPEVSPR NKNGQGIKQL GLFVDDGPCP ELGRLDSEPL IAAHRASVFF GTDLQARLVA QGIDTLILVG IASTGVVLSS VAHASDADFR LYTVKDCCYD PDQVVHEHLF ATAFDTRTTV LSLDDALHLL A
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