Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4888 |
Symbol | |
ID | 6181144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2035119 |
End bp | 2036039 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641684641 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811552 |
Protein GI | 172063901 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.842782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000000597964 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAGTTGT CGTTTGAAGT TCTGGAGGCG CTCGATGCCA TAGACCGCGC GGGCACGTTC GCGGAGGCAG CCGTGCTGAT TCATCGCGTA CCGTCTGCAC TGTCCTACCT GGTGCAAAAG GCAGAGAGCG ATCTCGGCGT CATCCTGTTC GATCGCAGCG GGCGGCGTGC GCAGTTGACC GAGGCGGGAC GACTGCTCGT AGAGGACGGT CGTCGTCTGC TCCAGGCGGG GCGGGAGCTG GAAAACAAAG TCCGGGGTGT CCACGCGGGT TGGGAGGCCG AACTCAGACT ATGCCTCGAC GAGATTCTTC CGCTCCCGTC GTTGTGGCCG CACGTGCGCG CCTTCTATGA CATGAAGCTG ACCACGCGGC TGCGTCTATC GACCGAAGTG CTCGGCGGCG TATGGGATGC GCTCGTGACG GGGCGCGCGG ATATCGCGAT CGGTGCCGCA GGGGAGCCGC CGCACGCGCC GAACCTCGCG GCAAGGCCGA TCGGCCTGTT GCGCCATGTT TTCGTCGTGG CGCCGCATCA CCCGCTCGCC GCGGTCGAAC AACCGCTCGA CAGCGATACC ATTTCAAGCC ATCGCGGCGT CGTCATCAGC GACACGTCGC GCGCCCTCGA GCCGCGATCG GTGGCGATTC ATGACGGACA ACCGGTCATC ATCGTGCCGA CGCTGGCCGC CAAACTCGAC CTCCTTTGCG AAGGCATGGC CGTCGGCATG CTGCCCGCGC CCGTCGTCGA GGAGGCGATC CGTCAGGGAA AGCTCGTCGA GCGGCGCGTA ATCGGCGTGC GGGACCATAC AACCTGCTAC CTCGGCTGGC GTGAGGACAA GACCGGACGC GCATTGAAAT GGTGGATCAA CCGACTGGAT CAGATCGATC TGATCTCCAC GCTGTTCAGC ACGCGCGGCA TCGCGACCTG A
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Protein sequence | MKLSFEVLEA LDAIDRAGTF AEAAVLIHRV PSALSYLVQK AESDLGVILF DRSGRRAQLT EAGRLLVEDG RRLLQAGREL ENKVRGVHAG WEAELRLCLD EILPLPSLWP HVRAFYDMKL TTRLRLSTEV LGGVWDALVT GRADIAIGAA GEPPHAPNLA ARPIGLLRHV FVVAPHHPLA AVEQPLDSDT ISSHRGVVIS DTSRALEPRS VAIHDGQPVI IVPTLAAKLD LLCEGMAVGM LPAPVVEEAI RQGKLVERRV IGVRDHTTCY LGWREDKTGR ALKWWINRLD QIDLISTLFS TRGIAT
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