Gene BamMC406_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4888 
Symbol 
ID6181144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2035119 
End bp2036039 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID641684641 
ProductLysR family transcriptional regulator 
Protein accessionYP_001811552 
Protein GI172063901 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.842782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000597964 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGTTGT CGTTTGAAGT TCTGGAGGCG CTCGATGCCA TAGACCGCGC GGGCACGTTC 
GCGGAGGCAG CCGTGCTGAT TCATCGCGTA CCGTCTGCAC TGTCCTACCT GGTGCAAAAG
GCAGAGAGCG ATCTCGGCGT CATCCTGTTC GATCGCAGCG GGCGGCGTGC GCAGTTGACC
GAGGCGGGAC GACTGCTCGT AGAGGACGGT CGTCGTCTGC TCCAGGCGGG GCGGGAGCTG
GAAAACAAAG TCCGGGGTGT CCACGCGGGT TGGGAGGCCG AACTCAGACT ATGCCTCGAC
GAGATTCTTC CGCTCCCGTC GTTGTGGCCG CACGTGCGCG CCTTCTATGA CATGAAGCTG
ACCACGCGGC TGCGTCTATC GACCGAAGTG CTCGGCGGCG TATGGGATGC GCTCGTGACG
GGGCGCGCGG ATATCGCGAT CGGTGCCGCA GGGGAGCCGC CGCACGCGCC GAACCTCGCG
GCAAGGCCGA TCGGCCTGTT GCGCCATGTT TTCGTCGTGG CGCCGCATCA CCCGCTCGCC
GCGGTCGAAC AACCGCTCGA CAGCGATACC ATTTCAAGCC ATCGCGGCGT CGTCATCAGC
GACACGTCGC GCGCCCTCGA GCCGCGATCG GTGGCGATTC ATGACGGACA ACCGGTCATC
ATCGTGCCGA CGCTGGCCGC CAAACTCGAC CTCCTTTGCG AAGGCATGGC CGTCGGCATG
CTGCCCGCGC CCGTCGTCGA GGAGGCGATC CGTCAGGGAA AGCTCGTCGA GCGGCGCGTA
ATCGGCGTGC GGGACCATAC AACCTGCTAC CTCGGCTGGC GTGAGGACAA GACCGGACGC
GCATTGAAAT GGTGGATCAA CCGACTGGAT CAGATCGATC TGATCTCCAC GCTGTTCAGC
ACGCGCGGCA TCGCGACCTG A
 
Protein sequence
MKLSFEVLEA LDAIDRAGTF AEAAVLIHRV PSALSYLVQK AESDLGVILF DRSGRRAQLT 
EAGRLLVEDG RRLLQAGREL ENKVRGVHAG WEAELRLCLD EILPLPSLWP HVRAFYDMKL
TTRLRLSTEV LGGVWDALVT GRADIAIGAA GEPPHAPNLA ARPIGLLRHV FVVAPHHPLA
AVEQPLDSDT ISSHRGVVIS DTSRALEPRS VAIHDGQPVI IVPTLAAKLD LLCEGMAVGM
LPAPVVEEAI RQGKLVERRV IGVRDHTTCY LGWREDKTGR ALKWWINRLD QIDLISTLFS
TRGIAT