| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4880 |
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| Symbol | |
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| ID | 6179769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2017065 |
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| End bp | 2019287 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684633 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_001811544 |
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| Protein GI | 172063893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0220077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000344612 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAATC ACGCCGAAGC CACCACGACG CAGGCGCCGC AAGTCGCGCC GCTTCCTTCG
ACCCAAGCGT CCGGCCCCGC ATTCATCGCG CCCGAAGCCG ATCCGCAGGC GCTCGCGCGC
AACAACCAGT ACGTGCTCAA ATCCGGCGAC GCGTTCGTGG TCGGCGACGC GCTCGGCGAC
ATCAGCGGGC GCGACGACGG CCTGTACGTC GACGACATGC GCGTGCTGTC GACCTGGCGC
CTGACCTTCG GCGGCCGCGC GCCGTCGCTG CTGTCGGGCG CGACCAGTGC GGACAACGCG
TCGTTTACCG CGCATCTGAC CAATCGCCCG CTGCCGCCGC TCGGCGGCAA GGAGACGCCC
GAAGGCGTGA TCCACATCGA ACGCACGCGC GTGCTCGCGG GCGACGTGCT GTACGAAGCG
CTGACGCTGA CGAACTACGG CGCGAGCGAG GCCGAAGTGC CGCTGTCGCT GTCGTTCACG
GCGGATTTCA AGGACATGTT CGAAGTGCGC GGCACGCAGC GCCCGAAGCG CGGCACGGTG
GCCGCGCCGC GTGTCGACGC AGGTGCGGTG CGGCTGCGCT ACGACGGCCT CGACAAAGTC
GAGCGCAACG TGACCGTGCA TTTCTCGCCG GCGCCCGACG CGCTGTCGGT CGATCGTGCC
GACTACACGC TGACGATCGC CGCGCAGGCA TGCGTGTCGA TCTACCTGAC CGTCGATGCG
ACGCTCGATC CGGCGCACCA CGGCGCGGAC CCGGGATGCG GGCGTGTCGC GCTGCGCACC
GCGCTCGTCG GCGTGCATCG CGAGATGCGT TCGCGACGCG AGTCGATGGC GCGCGTACAC
ACCGGCAATC CGCTGTTCGA CGCGTGGCTC GACCGGTCGC TCGCGGATCT CGGGCTGCTC
ACGACGCAGC TCGACACCGG CCCGTATCCG TATGCGGGCA TTCCGTGGTT CTCGACCCCG
TTCGGCCGCG ACGCGGTGAT CACGTCGCTG CAGATGCTGT GGCTGCAACC GTCGCTCGCG
CGCGGCGTGC TGCGCTTTCT CGCCGCGCAT CAGGCGCGCG AGACCTCCGC GTTCCGCGAC
GCCGAGCCCG GCAAGATCAT GCACGAGTTC CGCCGCAGCG AGATGGCCGC GACGGGCGAG
GTGCCGTTCG CGCTGTATTA CGGCGGCGTC GACACGACCC CGCTGTTCAT CGTGCTCGCG
GGCGCGTACG TCGAACACAC CGGCGACGAT GCGCTGATCG ACGAGCTGTG GCCCGCGCTC
GAGCGTGCCG CGCAATGGGT GATCGACAAG TGCGACCGCA ATCCGTACGG GCTGCTCGAC
TACCAGCGCA CGTCGGAGCG CGGCCTCGCG AACCAGGGCT GGAAGGACAG TCACGATTCG
GTGTTCCACG CGGACGGCCG CTTCCCGGAC GGCCCGATCG CGCTCGTCGA AGTGCAGGCG
TATGCGTGCG CGGCGCTCGA GGCGATGTCG ATGTGCTCGC GCCGGCGCGG GCACGCGGCC
GATGCGACGC GCTATGCGCT GCGCGCGAGG GCGCTGCGCG ACCAGGTCGA CGCGCTGTTC
TGGATGCCGG ACGCTCAGTT CTACGGGATC GCGCTCGACG GTCACGGCGA TCTGTGCCGC
GTGCTCGCGT CGAACGCGGG CCAGCTGCTC GCGTTCGGTT TGCCCGACGC GCAGCGCGGC
GCGGCGGTCG CGAGCGTGCT CGGCTCGACG CTGTTTCAGA CGGGCTGGGG CATCCGCACG
CTCGCGGCCG GCCAGCCGCG CTTCAACCCG ATGGCCTATC ACAACGGGTC GGTGTGGCCG
CACGACAATG CGCTGATCGC GCGCGGGCTC GCGCGCTACG GCGACAAGAC GGCCGCGGTG
AACCTGCTGC GCGCGTTGTT CGAGGCGGCG GTGAGCTTCG AGATGCGGCT GCCGGAGCTG
TTCTGCGGGT TCCCGCGCCG GCGCGGCGAA CCGCCGACGG CCTACCCGGT CGCGTGCCTG
CCGCAGGCGT GGGCGGCCGG CGCGCCGTTC ATGATGCTGC AGGCGTGTCT GGGTGTGAGC
GTCGACGCGG CGCGCCACGA GGTGCGGGTC GAGCGCCCGA CGCTGCCCGA AGGCGTCGAC
TGGCTGCGCA TCGACGATCT GCGCGTCGGC GACGAAACCG TCTCGCTGAC GTTCCGTCGC
GTCGACGGCC AGGTGGTCGC GGCGGCGCAG CCGGGTCGCG TGAAGGTGGT CGCGCTGCTG
TAG
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| Protein sequence | MPNHAEATTT QAPQVAPLPS TQASGPAFIA PEADPQALAR NNQYVLKSGD AFVVGDALGD
ISGRDDGLYV DDMRVLSTWR LTFGGRAPSL LSGATSADNA SFTAHLTNRP LPPLGGKETP
EGVIHIERTR VLAGDVLYEA LTLTNYGASE AEVPLSLSFT ADFKDMFEVR GTQRPKRGTV
AAPRVDAGAV RLRYDGLDKV ERNVTVHFSP APDALSVDRA DYTLTIAAQA CVSIYLTVDA
TLDPAHHGAD PGCGRVALRT ALVGVHREMR SRRESMARVH TGNPLFDAWL DRSLADLGLL
TTQLDTGPYP YAGIPWFSTP FGRDAVITSL QMLWLQPSLA RGVLRFLAAH QARETSAFRD
AEPGKIMHEF RRSEMAATGE VPFALYYGGV DTTPLFIVLA GAYVEHTGDD ALIDELWPAL
ERAAQWVIDK CDRNPYGLLD YQRTSERGLA NQGWKDSHDS VFHADGRFPD GPIALVEVQA
YACAALEAMS MCSRRRGHAA DATRYALRAR ALRDQVDALF WMPDAQFYGI ALDGHGDLCR
VLASNAGQLL AFGLPDAQRG AAVASVLGST LFQTGWGIRT LAAGQPRFNP MAYHNGSVWP
HDNALIARGL ARYGDKTAAV NLLRALFEAA VSFEMRLPEL FCGFPRRRGE PPTAYPVACL
PQAWAAGAPF MMLQACLGVS VDAARHEVRV ERPTLPEGVD WLRIDDLRVG DETVSLTFRR
VDGQVVAAAQ PGRVKVVALL
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