| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4878 |
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| Symbol | |
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| ID | 6179767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2015327 |
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| End bp | 2016217 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684631 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811542 |
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| Protein GI | 172063891 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000628995 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000000242081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAAGC TCCGCCCTCA CCTTCCACTG AATGCGTTGC GCGCGTTCGA ATCGTCGGCG
CGCCATCTGA ATTTCACGCG CGCCGGCCTC GAGCTGAGCG TGACGCAGGC GGCCGTGAGC
CAGCAGGTGC GCTCGCTGGA GGAGCGGCTC GGCTGCGCGC TGTTCACCCG GCTGCCGCGC
GGCCTCGGGC TCACCGACGA AGGACGCGCG CTGCTGCCGG TGCTCAGCGA CGCATTCAGC
CGGATCGAAA CCGTGCTCAA GCAGTTCGAC GGCGGGCGCT TCCACGAGGT GCTGACGCTC
GGCGCGGTCG GCACCTTTGC CATAGGCTGG CTAATGCCAC GGTTGAAGCG CTTCGGCGAC
ACGCACCCGT TCGTCGAGCT GCGGCTGCGG ACCAACAACA ACGTCGTCGA CCTCGCGGCC
GAGGGCCTCG ATTTCGCGAT CCGCTTCGGT GAAGGCAACT GGCCGGCGAC GCGCAACGAG
CGGCTGCTCG ACGCGCCGCT CACCGCGCTG TGCGCGCCGG AGATCGCGCG GCGCCTCGCG
GCGCCGGCCG ATCTCGCGAA CGAAACGCTG CTGCGCTCGT ACCGCACCGA CGAATGGCTC
GGCTGGTTCG ACGCCGCGCA GCTCGAACCG TGGCCGGTCA ACGGGCCGGT GTTCGATTCG
TCGCGGCTGA TGGTCGAGGC GGCGATGCAA GGCGCGGGCA TCGCGCTCGC GCCGGCCTGC
ATGTTCGCGC GCGAACTGCA GCTGGGCCTG CTCGCGCGGC CGCTCGACAT CGACGTGCGC
GCGGGCGGCT ACTGGCTCAC GTCGCTGAAG TCGAAGCCGC TCACGCCGGC GATGACGCTG
TTTCGCGACT GGATCGTCGC GGAAGCGGCC GGCGCGGCAC CGGTCGAATG A
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| Protein sequence | MTKLRPHLPL NALRAFESSA RHLNFTRAGL ELSVTQAAVS QQVRSLEERL GCALFTRLPR
GLGLTDEGRA LLPVLSDAFS RIETVLKQFD GGRFHEVLTL GAVGTFAIGW LMPRLKRFGD
THPFVELRLR TNNNVVDLAA EGLDFAIRFG EGNWPATRNE RLLDAPLTAL CAPEIARRLA
APADLANETL LRSYRTDEWL GWFDAAQLEP WPVNGPVFDS SRLMVEAAMQ GAGIALAPAC
MFARELQLGL LARPLDIDVR AGGYWLTSLK SKPLTPAMTL FRDWIVAEAA GAAPVE
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