Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4874 |
Symbol | |
ID | 6180482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2011096 |
End bp | 2012472 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684627 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001811538 |
Protein GI | 172063887 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000686699 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000293708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCGCG TGCGACACGC GATCGAGCGC TGGCGCAGTG CGTCGTTGCG GCGGCGCCTG TTGATGTGGC TGCTGCCCGC CGCTTGCGTG ATCGGCCTGG TCGCGAGCGC GGGCACCTAC TGGGGCGCGC TGCGCGAGCT CGACGATCTC CTCGACGACC AGATGCGCAG CATGTCGAAG CAGATAGTCG TCGGCCCGAA CGGCGAGCTG TCGTTTCGCG ACCATGGCGA CGGCAAGCAC GACTTCGAGG CCAGCGATCC CGACGCCGTG CTGCTGCAGG TCTGGCGCAA CGGCACACTG GTCTACTCGA CCGATCGCGA ATCCGCGCTG CCGCCGCCCG CGCAGACGGG CGTCGGCACC GTCGACGTCG GCGGCCAGCC GTGGCGCACC TATGTGACCC AACGCGGCGG CACGACGATC CGGCTCGCGC AAGCGCGCCA CGCACGCTGG GAAGCGATCG CGGGCATCGC GGTGCATTTG CTTTGGCCGG TGTTCTCGAT GCTGCCGGTG CTCGCGATCG GGCTGTGGTT CGGCATCGGC GCGGGGCTGC GGCCGCTGCG CACGATCGCA TCGGGTCTGA AGCGCAGGAA TGCGAACAAT CTGGAACCGG TCGATGTCGC GTCGATGCCG AACGAGGTGC GGCCGCTCGC CGAAGCGATC AACGACCTGC TCGCGCGGCT CGACCGTTCG TTCACGCTGC AGCGCCACTT CATCGCCGAT GCCGCGCACG AGCTACGCAC GCCGATCATG GGGCTGTCGA TCCAGTCGCA ATTGCTGCGG CGCGCGGCGA GCTCCGACGA ACGTGAACAG ATCCTCGCGC AGATCCATGC AGGCACGACA CGCCTTGGCC ACCTTGCCGA GCAGCTACTG ACGCTCGCGC GTCTCGAACC CGATGCGCAG ACGGGCGCGT CCGCGTCCAC GCCCGTCGAT CTCGCCGCGC TGTGCCGCTC GGTGGTCGCC GACCGCACGC GCGTCGCCGA TGCGCACCGG ATCGACCTCG GCGCGATCGT GTCGTCGCCG GTGATGGCCG CCGGCAATAT CGATACGTTG CGCGTACTGC TGAATAACCT CGTCGACAAC GCGATCCGCT ACGCGGGCGA CGGCGCACGC GTCGACGTAT CCGCGCGCAT CGACGGCGCC ACGCCCGTGC TCGAAGTCGC CGACGACGGC CCCGGCATCC CGGAAGCCGA GCGCACGGAA GTCTGGGAGC GCTTCTATCG CGGCGAGGGC GCGCAGGCCG TCACGGCGTC GGGCAGCGGA CTCGGGCTGT CGATCGTCAA GCGGATCGCC GAACAGCACC GCGCGACGGT CGCGCTCGGC ACGACGCCGG GCGGGCGCGG GCTGACCGTG ACGGTGCGCT TTCCCGTGCC GGCCTGA
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Protein sequence | MTRVRHAIER WRSASLRRRL LMWLLPAACV IGLVASAGTY WGALRELDDL LDDQMRSMSK QIVVGPNGEL SFRDHGDGKH DFEASDPDAV LLQVWRNGTL VYSTDRESAL PPPAQTGVGT VDVGGQPWRT YVTQRGGTTI RLAQARHARW EAIAGIAVHL LWPVFSMLPV LAIGLWFGIG AGLRPLRTIA SGLKRRNANN LEPVDVASMP NEVRPLAEAI NDLLARLDRS FTLQRHFIAD AAHELRTPIM GLSIQSQLLR RAASSDEREQ ILAQIHAGTT RLGHLAEQLL TLARLEPDAQ TGASASTPVD LAALCRSVVA DRTRVADAHR IDLGAIVSSP VMAAGNIDTL RVLLNNLVDN AIRYAGDGAR VDVSARIDGA TPVLEVADDG PGIPEAERTE VWERFYRGEG AQAVTASGSG LGLSIVKRIA EQHRATVALG TTPGGRGLTV TVRFPVPA
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